RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 HEXIM2Q96MH2 286 aaKnown RBP35.14■■■■□ 3.22
CBX4-203ENST00000494546 LINC00597Q9H2U6 94 aa35.14■■■■□ 3.22
CBX4-203ENST00000494546 COQ4Q9Y3A0 265 aa35.14■■■■□ 3.22
CBX4-203ENST00000494546 STX17P56962 302 aa35.13■■■■□ 3.21
CBX4-203ENST00000494546 HECTD3Q5T447 861 aa35.13■■■■□ 3.21
CBX4-203ENST00000494546 Q6ZS52 159 aa35.13■■■■□ 3.21
CBX4-203ENST00000494546 CHFRQ96EP1 664 aa35.13■■■■□ 3.21
CBX4-203ENST00000494546 FBXO44Q9H4M3 255 aa35.13■■■■□ 3.21
CBX4-203ENST00000494546 CCR3P51677 355 aa35.12■■■■□ 3.21
CBX4-203ENST00000494546 CCINQ13939 588 aa35.12■■■■□ 3.21
CBX4-203ENST00000494546 SEMA4AQ9H3S1 761 aa35.12■■■■□ 3.21
CBX4-203ENST00000494546 FAM92AA1XBS5 289 aa35.11■■■■□ 3.21
CBX4-203ENST00000494546 COCHO43405 550 aa35.11■■■■□ 3.21
CBX4-203ENST00000494546 GJA4P35212 333 aa35.11■■■■□ 3.21
CBX4-203ENST00000494546 GRSF1Q12849 480 aaKnown RBP eCLIP35.11■■■■□ 3.21
CBX4-203ENST00000494546 PAK1Q13153 545 aa35.11■■■■□ 3.21
CBX4-203ENST00000494546 PPP2R5DQ14738 602 aa35.11■■■■□ 3.21
CBX4-203ENST00000494546 PPP1R26Q5T8A7 1209 aaPredicted RBP35.11■■■■□ 3.21
CBX4-203ENST00000494546 MAMSTRQ6ZN01 415 aa35.11■■■■□ 3.21
CBX4-203ENST00000494546 GPRIN1Q7Z2K8 1008 aa35.11■■■■□ 3.21
CBX4-203ENST00000494546 CFAP97Q9P2B7 532 aa35.11■■■■□ 3.21
CBX4-203ENST00000494546 ZFHX2Q9C0A1 2572 aaPredicted RBP35.11■■■■□ 3.21
CBX4-203ENST00000494546 HELZP42694 1942 aaKnown RBP35.1■■■■□ 3.21
CBX4-203ENST00000494546 SCAMP3O14828 347 aaKnown RBP35.1■■■■□ 3.21
CBX4-203ENST00000494546 CXCL12P48061 93 aa35.1■■■■□ 3.21
CBX4-203ENST00000494546 FMO5P49326 533 aa35.1■■■■□ 3.21
CBX4-203ENST00000494546 SATB1Q01826 763 aa35.1■■■■□ 3.21
CBX4-203ENST00000494546 LRMPQ12912 555 aa35.1■■■■□ 3.21
CBX4-203ENST00000494546 TMEM196Q5HYL7 178 aa35.1■■■■□ 3.21
CBX4-203ENST00000494546 SNX30Q5VWJ9 437 aa35.1■■■■□ 3.21
CBX4-203ENST00000494546 SPEM1Q8N4L4 309 aa35.1■■■■□ 3.21
CBX4-203ENST00000494546 SLC4A11Q8NBS3 891 aa35.1■■■■□ 3.21
CBX4-203ENST00000494546 ATRIPQ8WXE1 791 aa35.1■■■■□ 3.21
CBX4-203ENST00000494546 TMEM176AQ96HP8 235 aa35.1■■■■□ 3.21
CBX4-203ENST00000494546 CCSER2Q9H7U1 834 aa35.1■■■■□ 3.21
CBX4-203ENST00000494546 ZSCAN32Q9NX65 697 aa35.1■■■■□ 3.21
CBX4-203ENST00000494546 TRDMT1O14717 391 aaKnown RBP35.09■■■■□ 3.21
CBX4-203ENST00000494546 LMNAP02545 664 aaKnown RBP35.09■■■■□ 3.21
CBX4-203ENST00000494546 ZDHHC11BP0C7U3 371 aa35.09■■■■□ 3.21
CBX4-203ENST00000494546 RAD23BP54727 409 aa35.09■■■■□ 3.21
CBX4-203ENST00000494546 NR1H3Q13133 447 aa35.09■■■■□ 3.21
CBX4-203ENST00000494546 CUL2Q13617 745 aa35.09■■■■□ 3.21
CBX4-203ENST00000494546 FSTL4Q6MZW2 842 aa35.09■■■■□ 3.21
CBX4-203ENST00000494546 FOXR2Q6PJQ5 311 aa35.09■■■■□ 3.21
CBX4-203ENST00000494546 NACA2Q9H009 215 aa35.09■■■■□ 3.21
CBX4-203ENST00000494546 MYH10P35580 1976 aa35.09■■■■□ 3.21
CBX4-203ENST00000494546 MYO15AQ9UKN7 3530 aa35.09■■■■□ 3.21
CBX4-203ENST00000494546 HHLA1C9JL84 531 aa35.08■■■■□ 3.21
CBX4-203ENST00000494546 NFATC1O95644 943 aa35.08■■■■□ 3.21
CBX4-203ENST00000494546 ACO1P21399 889 aaKnown RBP35.08■■■■□ 3.21
CBX4-203ENST00000494546 GALK1P51570 392 aa35.08■■■■□ 3.21
CBX4-203ENST00000494546 NAIF1Q69YI7 327 aaPredicted RBP35.08■■■■□ 3.21
CBX4-203ENST00000494546 DDX42Q86XP3 938 aaKnown RBP eCLIP35.08■■■■□ 3.211e-6■■■■□ 20.6
CBX4-203ENST00000494546 SYNPOQ8N3V7 929 aa35.08■■■■□ 3.21
CBX4-203ENST00000494546 TRIML1Q8N9V2 468 aa35.08■■■■□ 3.21
CBX4-203ENST00000494546 P2RY13Q9BPV8 354 aa35.08■■■■□ 3.21
CBX4-203ENST00000494546 DUSP16Q9BY84 665 aa35.08■■■■□ 3.21
CBX4-203ENST00000494546 FAM124BQ9H5Z6 455 aaPredicted RBP35.08■■■■□ 3.21
CBX4-203ENST00000494546 TLR8Q9NR97 1041 aaKnown RBP35.08■■■■□ 3.21
CBX4-203ENST00000494546 KIAA1468Q9P260 1216 aa35.08■■■■□ 3.21
CBX4-203ENST00000494546 PCDHGA2Q9Y5H1 932 aa35.08■■■■□ 3.21
CBX4-203ENST00000494546 PGFP49763 221 aa35.07■■■■□ 3.2
CBX4-203ENST00000494546 TUBP50607 506 aa35.07■■■■□ 3.2
CBX4-203ENST00000494546 EXOC4Q96A65 974 aa35.07■■■■□ 3.2
CBX4-203ENST00000494546 FBRSL1Q9HCM7 1045 aaKnown RBP35.07■■■■□ 3.2
CBX4-203ENST00000494546 PNPLA8Q9NP80 782 aa35.07■■■■□ 3.2
CBX4-203ENST00000494546 USP34Q70CQ2 3546 aa35.06■■■■□ 3.2
CBX4-203ENST00000494546 CYP26A1O43174 497 aa35.06■■■■□ 3.2
CBX4-203ENST00000494546 ZBTB44Q8NCP5 570 aa35.06■■■■□ 3.2
CBX4-203ENST00000494546 NELL1Q92832 810 aa35.06■■■■□ 3.2
CBX4-203ENST00000494546 SCML2Q9UQR0 700 aa35.06■■■■□ 3.2
CBX4-203ENST00000494546 SLC9A3R1O14745 358 aaPredicted RBP35.05■■■■□ 3.2
CBX4-203ENST00000494546 EGFP01133 1207 aa35.05■■■■□ 3.2
CBX4-203ENST00000494546 TDGF1P13385 188 aa35.05■■■■□ 3.2
CBX4-203ENST00000494546 YWHAEP62258 255 aaKnown RBP35.05■■■■□ 3.2
CBX4-203ENST00000494546 KIAA1958Q8N8K9 716 aa35.05■■■■□ 3.2
CBX4-203ENST00000494546 CD101Q93033 1021 aa35.05■■■■□ 3.2
CBX4-203ENST00000494546 SRRTQ9BXP5 876 aaKnown RBP35.05■■■■□ 3.2
CBX4-203ENST00000494546 FAM126AQ9BYI3 521 aaPredicted RBP35.05■■■■□ 3.2
CBX4-203ENST00000494546 VPS13AQ96RL7 3174 aa35.05■■■■□ 3.2
CBX4-203ENST00000494546 TLR5O60602 858 aa35.04■■■■□ 3.2
CBX4-203ENST00000494546 ZFRQ96KR1 1074 aaKnown RBP35.04■■■■□ 3.2
CBX4-203ENST00000494546 C2orf42Q9NWW7 574 aa35.04■■■■□ 3.2
CBX4-203ENST00000494546 GNA14O95837 355 aa35.03■■■■□ 3.2
CBX4-203ENST00000494546 DRD1P21728 446 aa35.03■■■■□ 3.2
CBX4-203ENST00000494546 TBXAS1P24557 533 aaPredicted RBP35.03■■■■□ 3.2
CBX4-203ENST00000494546 NRLP54845 237 aa35.03■■■■□ 3.2
CBX4-203ENST00000494546 CETN1Q12798 172 aa35.03■■■■□ 3.2
CBX4-203ENST00000494546 ARHGAP17Q68EM7 881 aa35.03■■■■□ 3.2
CBX4-203ENST00000494546 SH3BP1Q9Y3L3 701 aa35.03■■■■□ 3.2
CBX4-203ENST00000494546 FANCMQ8IYD8 2048 aa35.03■■■■□ 3.2
CBX4-203ENST00000494546 KIF11P52732 1056 aa35.02■■■■□ 3.2
CBX4-203ENST00000494546 ADGRG2Q8IZP9 1017 aa35.02■■■■□ 3.2
CBX4-203ENST00000494546 NT5C1BQ96P26 610 aa35.02■■■■□ 3.2
CBX4-203ENST00000494546 OSER1Q9NX31 292 aa35.02■■■■□ 3.2
CBX4-203ENST00000494546 A0A1W2PQH9 124 aa35.01■■■■□ 3.2
CBX4-203ENST00000494546 E2F8A0AVK6 867 aa35.01■■■■□ 3.2
CBX4-203ENST00000494546 PMM2O15305 246 aa35.01■■■■□ 3.2
CBX4-203ENST00000494546 CYP17A1P05093 508 aa35.01■■■■□ 3.2
CBX4-203ENST00000494546 IRF1P10914 325 aa35.01■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms