RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 GOLGA2P5Q9HBQ8 144 aa8.81□□□□□ -1
RIF1-211ENST00000494333 BLOC1S4Q9NUP1 217 aa8.81□□□□□ -1
RIF1-211ENST00000494333 FNIP2Q9P278 1114 aa8.81□□□□□ -1
RIF1-211ENST00000494333 CCDC39Q9UFE4 941 aa8.81□□□□□ -1
RIF1-211ENST00000494333 ODF2LQ9ULJ1 636 aa8.81□□□□□ -1
RIF1-211ENST00000494333 SNX11Q9Y5W9 270 aa8.81□□□□□ -1
RIF1-211ENST00000494333 BDP1A6H8Y1 2624 aa8.8□□□□□ -1
RIF1-211ENST00000494333 H0YCG3 227 aa8.8□□□□□ -1
RIF1-211ENST00000494333 ABLIM1O14639 778 aa8.8□□□□□ -1
RIF1-211ENST00000494333 CLDN3O15551 220 aa8.8□□□□□ -1
RIF1-211ENST00000494333 TRAPPC3O43617 180 aa8.8□□□□□ -1
RIF1-211ENST00000494333 MATR3P43243 847 aaKnown RBP eCLIP8.8□□□□□ -1
RIF1-211ENST00000494333 CLCN7P51798 805 aa8.8□□□□□ -1
RIF1-211ENST00000494333 NCKAP1LP55160 1127 aa8.8□□□□□ -1
RIF1-211ENST00000494333 RNF4P78317 190 aa8.8□□□□□ -1
RIF1-211ENST00000494333 CREMQ03060 361 aa8.8□□□□□ -1
RIF1-211ENST00000494333 ELAVL2Q12926 359 aaKnown RBP8.8□□□□□ -1
RIF1-211ENST00000494333 PTPN21Q16825 1174 aa8.8□□□□□ -1
RIF1-211ENST00000494333 UPP1Q16831 310 aa8.8□□□□□ -1
RIF1-211ENST00000494333 XKR4Q5GH76 650 aa8.8□□□□□ -1
RIF1-211ENST00000494333 LILRA6Q6PI73 481 aa8.8□□□□□ -1
RIF1-211ENST00000494333 ZPBP2Q6X784 338 aa8.8□□□□□ -1
RIF1-211ENST00000494333 CCDC149Q6ZUS6 474 aa8.8□□□□□ -1
RIF1-211ENST00000494333 TDRD5Q8NAT2 981 aaKnown RBP8.8□□□□□ -1
RIF1-211ENST00000494333 DTWD2Q8NBA8 298 aa8.8□□□□□ -1
RIF1-211ENST00000494333 KREMEN2Q8NCW0 462 aa8.8□□□□□ -1
RIF1-211ENST00000494333 PIWIL2Q8TC59 973 aaKnown RBP8.8□□□□□ -1
RIF1-211ENST00000494333 HDAC7Q8WUI4 952 aa8.8□□□□□ -1
RIF1-211ENST00000494333 LARP4BQ92615 738 aaKnown RBP8.8□□□□□ -1
RIF1-211ENST00000494333 RAD54LQ92698 747 aa8.8□□□□□ -1
RIF1-211ENST00000494333 BICD1Q96G01 975 aa8.8□□□□□ -1
RIF1-211ENST00000494333 HRASLS5Q96KN8 279 aa8.8□□□□□ -1
RIF1-211ENST00000494333 UROC1Q96N76 676 aa8.8□□□□□ -1
RIF1-211ENST00000494333 ZMAT2Q96NC0 199 aaKnown RBP8.8□□□□□ -1
RIF1-211ENST00000494333 CLIC6Q96NY7 704 aa8.8□□□□□ -1
RIF1-211ENST00000494333 CLSTN3Q9BQT9 956 aa8.8□□□□□ -1
RIF1-211ENST00000494333 PLEKHA4Q9H4M7 779 aa8.8□□□□□ -1
RIF1-211ENST00000494333 PARVGQ9HBI0 331 aa8.8□□□□□ -1
RIF1-211ENST00000494333 SLC38A7Q9NVC3 462 aa8.8□□□□□ -1
RIF1-211ENST00000494333 ANKFY1Q9P2R3 1169 aa8.8□□□□□ -1
RIF1-211ENST00000494333 FBXO2Q9UK22 296 aaPredicted RBP8.8□□□□□ -1
RIF1-211ENST00000494333 MTMR6Q9Y217 621 aa8.8□□□□□ -1
RIF1-211ENST00000494333 SRPRBQ9Y5M8 271 aaKnown RBP8.8□□□□□ -1
RIF1-211ENST00000494333 ST14Q9Y5Y6 855 aa8.8□□□□□ -1
RIF1-211ENST00000494333 A0A1W2PQH9 124 aa8.79□□□□□ -1
RIF1-211ENST00000494333 TMEM221A6NGB7 291 aa8.79□□□□□ -1
RIF1-211ENST00000494333 TMEM189-UBE2V1I3L0A0 370 aa8.79□□□□□ -1
RIF1-211ENST00000494333 I3L4J1 428 aa8.79□□□□□ -1
RIF1-211ENST00000494333 M0R296 226 aa8.79□□□□□ -1
RIF1-211ENST00000494333 STX6O43752 255 aa8.79□□□□□ -1
RIF1-211ENST00000494333 C1RP00736 705 aa8.79□□□□□ -1
RIF1-211ENST00000494333 ASGR2P07307 311 aa8.79□□□□□ -1
RIF1-211ENST00000494333 KCNE1P15382 129 aa8.79□□□□□ -1
RIF1-211ENST00000494333 OR1D2P34982 312 aa8.79□□□□□ -1
RIF1-211ENST00000494333 ETFBP38117 255 aa8.79□□□□□ -1
RIF1-211ENST00000494333 BRCC3P46736 316 aa8.79□□□□□ -1
RIF1-211ENST00000494333 LIG4P49917 911 aa8.79□□□□□ -1
RIF1-211ENST00000494333 MCL1Q07820 350 aa8.79□□□□□ -1
RIF1-211ENST00000494333 SIGLEC14Q08ET2 396 aa8.79□□□□□ -1
RIF1-211ENST00000494333 BNIP3Q12983 259 aa8.79□□□□□ -1
RIF1-211ENST00000494333 NOLC1Q14978 699 aaKnown RBP eCLIP8.79□□□□□ -1
RIF1-211ENST00000494333 PSMD5Q16401 504 aa8.79□□□□□ -1
RIF1-211ENST00000494333 SLC10A6Q3KNW5 377 aa8.79□□□□□ -1
RIF1-211ENST00000494333 RRAGBQ5VZM2 374 aa8.79□□□□□ -1
RIF1-211ENST00000494333 PDXDC1Q6P996 788 aa8.79□□□□□ -1
RIF1-211ENST00000494333 CD300LGQ6UXG3 332 aa8.79□□□□□ -1
RIF1-211ENST00000494333 OTOP3Q7RTS5 596 aa8.79□□□□□ -1
RIF1-211ENST00000494333 ZDHHC14Q8IZN3 488 aa8.79□□□□□ -1
RIF1-211ENST00000494333 C19orf47Q8N9M1 422 aaKnown RBP8.79□□□□□ -1
RIF1-211ENST00000494333 CMASQ8NFW8 434 aaPredicted RBP8.79□□□□□ -1
RIF1-211ENST00000494333 SMG7Q92540 1137 aaKnown RBP8.79□□□□□ -1
RIF1-211ENST00000494333 MISP3Q96FF7 219 aa8.79□□□□□ -1
RIF1-211ENST00000494333 SNX27Q96L92 541 aa8.79□□□□□ -1
RIF1-211ENST00000494333 DHRS1Q96LJ7 313 aa8.79□□□□□ -1
RIF1-211ENST00000494333 USP28Q96RU2 1077 aa8.79□□□□□ -1
RIF1-211ENST00000494333 PANK2Q9BZ23 570 aa8.79□□□□□ -1
RIF1-211ENST00000494333 HAPLN2Q9GZV7 340 aa8.79□□□□□ -1
RIF1-211ENST00000494333 ZSCAN16Q9H4T2 348 aaPredicted RBP8.79□□□□□ -1
RIF1-211ENST00000494333 ZFP64Q9NPA5 681 aa8.79□□□□□ -1
RIF1-211ENST00000494333 TBX20Q9UMR3 447 aa8.79□□□□□ -1
RIF1-211ENST00000494333 SORCS3Q9UPU3 1222 aa8.79□□□□□ -1
RIF1-211ENST00000494333 K7ENM7 598 aa8.78□□□□□ -1
RIF1-211ENST00000494333 PODXLO00592 558 aa8.78□□□□□ -1
RIF1-211ENST00000494333 HNRNPDLO14979 420 aaKnown RBP8.78□□□□□ -1
RIF1-211ENST00000494333 MEFVO15553 781 aaPredicted RBP8.78□□□□□ -1
RIF1-211ENST00000494333 ADAM12O43184 909 aa8.78□□□□□ -1
RIF1-211ENST00000494333 TBCAO75347 108 aaKnown RBP8.78□□□□□ -1
RIF1-211ENST00000494333 CLTAP09496 248 aa8.78□□□□□ -1
RIF1-211ENST00000494333 TKTP29401 623 aaKnown RBP8.78□□□□□ -1
RIF1-211ENST00000494333 NMT1P30419 496 aaKnown RBP8.78□□□□□ -1
RIF1-211ENST00000494333 RPL9P32969 192 aaKnown RBP8.78□□□□□ -1
RIF1-211ENST00000494333 ZNF131P52739 623 aa8.78□□□□□ -1
RIF1-211ENST00000494333 PRKCQQ04759 706 aa8.78□□□□□ -1
RIF1-211ENST00000494333 SPAG1Q07617 926 aa8.78□□□□□ -1
RIF1-211ENST00000494333 SLC39A14Q15043 492 aa8.78□□□□□ -1
RIF1-211ENST00000494333 PPP2R5EQ16537 467 aa8.78□□□□□ -1
RIF1-211ENST00000494333 ZC2HC1CQ53FD0 456 aaPredicted RBP8.78□□□□□ -1
RIF1-211ENST00000494333 CYP26C1Q6V0L0 522 aa8.78□□□□□ -1
RIF1-211ENST00000494333 BMP8AQ7Z5Y6 402 aa8.78□□□□□ -1
RIF1-211ENST00000494333 STAMQ92783 540 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms