RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 NUP210Q8TEM1 1887 aaPredicted RBP13.14□□□□□ -0.31
TRA2A-209ENST00000494255 C2orf78A6NCI8 922 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 TNFRSF10AO00220 468 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 TULP2O00295 520 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 ECI2O75521 394 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 ZBED1O96006 694 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 CKMP06732 381 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 CCDC172P0C7W6 258 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 CYP11B1P15538 503 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 HDCP19113 662 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 ACADSBP45954 432 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 RGS7P49802 495 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 ADIGQ0VDE8 80 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 TDGQ13569 410 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 RAB41Q5JT25 222 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 TANGO2Q6ICL3 276 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 POTEHQ6S545 545 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 CCDC186Q7Z3E2 898 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 ARHGAP18Q8N392 663 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 ARL14EPQ8N8R7 260 aaPredicted RBP13.13□□□□□ -0.31
TRA2A-209ENST00000494255 ST13P5Q8NFI4 369 aaPredicted RBP13.13□□□□□ -0.31
TRA2A-209ENST00000494255 ELSPBP1Q96BH3 223 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 HSFY1Q96LI6 401 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 NOX5Q96PH1 765 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 NUP58Q9BVL2 599 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 XPO4Q9C0E2 1151 aaKnown RBP13.13□□□□□ -0.31
TRA2A-209ENST00000494255 ST7Q9NRC1 585 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 MUTYHQ9UIF7 546 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 PCDHGC3Q9UN70 934 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 USP3Q9Y6I4 520 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 MYO10Q9HD67 2058 aa13.13□□□□□ -0.31
TRA2A-209ENST00000494255 LCP1P13796 627 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 GPD2P43304 727 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 PSEN1P49768 467 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 HECTD3Q5T447 861 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 TAF3Q5VWG9 929 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 SNX30Q5VWJ9 437 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 PMF1Q6P1K2 205 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 SLC44A3Q8N4M1 653 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 CELF5Q8N6W0 485 aaKnown RBP13.12□□□□□ -0.31
TRA2A-209ENST00000494255 STK32AQ8WU08 396 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 IQCDQ96DY2 449 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 ULBP1Q9BZM6 244 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 EDEM3Q9BZQ6 932 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 LHX5Q9H2C1 402 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 KIF9Q9HAQ2 790 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 TDP1Q9NUW8 608 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 OBP2AQ9NY56 170 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 MYO6Q9UM54 1294 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 A0A1W2PQH9 124 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 HEPACAM2A8MVW5 462 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 DCXO43602 365 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 FBXO21O94952 628 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 CFHP08603 1231 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 ZDHHC11BP0C7U3 371 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 ALADP13716 330 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 FCARP24071 287 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 VIPR2P41587 438 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 TUBP50607 506 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 SNX16P57768 344 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 ARID5AQ03989 594 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 NOP9Q86U38 636 aaKnown RBP13.12□□□□□ -0.31
TRA2A-209ENST00000494255 ZNF677Q86XU0 584 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 GPIHBP1Q8IV16 184 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 PASD1Q8IV76 773 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 YAF2Q8IY57 180 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 UBALD2Q8IYN6 164 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 EPS8L1Q8TE68 723 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 DEPDC1BQ8WUY9 529 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 CYP2S1Q96SQ9 504 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 NACA2Q9H009 215 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 CYLDQ9NQC7 956 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 CNGB3Q9NQW8 809 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 NAGPAQ9UK23 515 aa13.12□□□□□ -0.31
TRA2A-209ENST00000494255 TLR5O60602 858 aa13.11□□□□□ -0.31
TRA2A-209ENST00000494255 PRAMEF12O95522 483 aa13.11□□□□□ -0.31
TRA2A-209ENST00000494255 OAS1P00973 400 aaKnown RBP13.11□□□□□ -0.31
TRA2A-209ENST00000494255 MBL2P11226 248 aaPredicted RBP13.11□□□□□ -0.31
TRA2A-209ENST00000494255 RALAP11233 206 aa13.11□□□□□ -0.31
TRA2A-209ENST00000494255 FERP16591 822 aa13.11□□□□□ -0.31
TRA2A-209ENST00000494255 PBX1P40424 430 aa13.11□□□□□ -0.31
TRA2A-209ENST00000494255 ZNF268Q14587 947 aaPredicted RBP13.11□□□□□ -0.31
TRA2A-209ENST00000494255 FIGNQ5HY92 759 aa13.11□□□□□ -0.31
TRA2A-209ENST00000494255 PM20D1Q6GTS8 502 aa13.11□□□□□ -0.31
TRA2A-209ENST00000494255 TADA2BQ86TJ2 420 aa13.11□□□□□ -0.31
TRA2A-209ENST00000494255 SCML4Q8N228 414 aa13.11□□□□□ -0.31
TRA2A-209ENST00000494255 TMEM35BQ8NCS4 154 aa13.11□□□□□ -0.31
TRA2A-209ENST00000494255 ZNF397Q8NF99 534 aaPredicted RBP13.11□□□□□ -0.31
TRA2A-209ENST00000494255 USP13Q92995 863 aaPredicted RBP13.11□□□□□ -0.31
TRA2A-209ENST00000494255 SLC22A12Q96S37 553 aa13.11□□□□□ -0.31
TRA2A-209ENST00000494255 CDK5RAP1Q96SZ6 601 aaKnown RBP13.11□□□□□ -0.31
TRA2A-209ENST00000494255 RPP25Q9BUL9 199 aaKnown RBP13.11□□□□□ -0.31
TRA2A-209ENST00000494255 SMG9Q9H0W8 520 aaKnown RBP13.11□□□□□ -0.31
TRA2A-209ENST00000494255 RBSNQ9H1K0 784 aa13.11□□□□□ -0.31
TRA2A-209ENST00000494255 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.11□□□□□ -0.313e-9■□□□□ 10.4
TRA2A-209ENST00000494255 C5orf42Q9H799 3197 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 UNC80Q8N2C7 3258 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 PIK3R2O00459 728 aa13.1□□□□□ -0.31
TRA2A-209ENST00000494255 SART1O43290 800 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms