RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 CNTNAP2Q9UHC6 1331 aa15.83■□□□□ 0.13
TNFRSF1B-203ENST00000492361 SRRM3A6NNA2 597 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 STBD1O95210 358 aa15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 CCND1P24385 295 aa15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 EFNA5P52803 228 aa15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 KPNB1Q14974 876 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 KLHL38Q2WGJ6 581 aa15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 MPZL3Q6UWV2 235 aa15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 C1orf127Q8N9H9 656 aa15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 TMEM109Q9BVC6 243 aa15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 SDCBP2Q9H190 292 aa15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 CACNG4Q9UBN1 327 aa15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 SOWAHBA6NEL2 793 aa15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 EDF1O60869 148 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 KCNA4P22459 653 aa15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 UBP1Q9NZI7 540 aa15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 RABGEF1Q9UJ41 708 aa15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1B-203ENST00000492361 NFKBIEO00221 500 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 ALOX15BO15296 676 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 KRT36O76013 467 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 ARL2P36404 184 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 PGM1P36871 562 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 R3HDM1Q15032 1099 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 CA9Q16790 459 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 FKBP1CQ5VVH2 108 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 TRMT10BQ6PF06 316 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 DSTYKQ6XUX3 929 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 DNAAF3Q8N9W5 541 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 TMEM176AQ96HP8 235 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 KCNG1Q9UIX4 513 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 NHSQ6T4R5 1651 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 ZMPSTE24O75844 475 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 GPD1P21695 349 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 RPL10AP62906 217 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 OLIG2Q13516 323 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 TMEM132DQ14C87 1099 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 PDK4Q16654 411 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 IER5Q5VY09 327 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 CLEC4CQ8WTT0 213 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 TMPRSS4Q9NRS4 437 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 ATXN2Q99700 1313 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 CXorf49A8MYA2 514 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 BHMG1C9JSJ3 638 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 CAPN9O14815 690 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 ATP9BO43861 1147 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 TFE3P19532 575 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 GRM1Q13255 1194 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 PEX6Q13608 980 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 CCDC142Q17RM4 750 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 CFAP157Q5JU67 520 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 FAM183BPQ6ZVS7 135 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 CATSPER4Q7RTX7 472 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 TTC13Q8NBP0 860 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 DDX50Q9BQ39 737 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 SYNPO2Q9UMS6 1093 aa15.82■□□□□ 0.12
TNFRSF1B-203ENST00000492361 APOL1O14791 398 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 MSCO60682 206 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 KRT37O76014 449 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 P4HA1P13674 534 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 OSBPP22059 807 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 AMPD1P23109 780 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 ACAT1P24752 427 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 PGGT1BP53609 377 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 AQP5P55064 265 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 PTP4A2Q12974 167 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 TSNAXIP1Q2TAA8 658 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 PLEKHG4Q58EX7 1191 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 C15orf39Q6ZRI6 1047 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 AFG1LQ8WV93 481 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 RNF34Q969K3 372 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 GRAMD1AQ96CP6 724 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 SRPK1Q96SB4 655 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 MED10Q9BTT4 135 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 KLC2Q9H0B6 622 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 DENND2DQ9H6A0 471 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 SHOC2Q9UQ13 582 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 KCNK1O00180 336 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 LYPLA1O75608 230 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 UBTFL6P0CB48 400 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 GBE1Q04446 702 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 CAPRIN2Q6IMN6 1127 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 PCGF5Q86SE9 256 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 LMNTD2Q8IXW0 634 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 SMC1BQ8NDV3 1235 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 DCPSQ96C86 337 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 ZCCHC18P0CG32 403 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 CCDC130P13994 396 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 KCNA3P22001 575 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 GCAP28676 217 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 MXD4Q14582 209 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 MAP1SQ66K74 1059 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 PAXIP1Q6ZW49 1069 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 PYROXD2Q8N2H3 581 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 ARFGAP1Q8N6T3 406 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 PPFIBP2Q8ND30 876 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 MOCOSQ96EN8 888 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 VCPIP1Q96JH7 1222 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 MFHAS1Q9Y4C4 1052 aa15.81■□□□□ 0.12
TNFRSF1B-203ENST00000492361 MAFBQ9Y5Q3 323 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms