RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 PPP4CP60510 307 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 TUBA4AP68366 448 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 DLG4P78352 724 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 NFX1Q12986 1120 aaKnown RBP6.69□□□□□ -1.34
CCDC6-202ENST00000491922 CHI3L2Q15782 390 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 INAQ16352 499 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 ZNF829Q3KNS6 432 aaPredicted RBP6.69□□□□□ -1.34
CCDC6-202ENST00000491922 ELMSAN1Q6PJG2 1045 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 DCDC5Q6ZRR9 648 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 NANOGNBQ7Z5D8 188 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 MYPNQ86TC9 1320 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 TRIM50Q86XT4 487 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 RHPN2Q8IUC4 686 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 NUDCD3Q8IVD9 361 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 RCOR2Q8IZ40 523 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 ADGRF4Q8IZF3 695 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 ARL10Q8N8L6 244 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 RDH13Q8NBN7 331 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 DDHD1Q8NEL9 900 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 TGFBRAP1Q8WUH2 860 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 SLC44A1Q8WWI5 657 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 DDX1Q92499 740 aaKnown RBP6.69□□□□□ -1.34
CCDC6-202ENST00000491922 FAM20AQ96MK3 541 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 INO80BQ9C086 356 aaPredicted RBP6.69□□□□□ -1.34
CCDC6-202ENST00000491922 FAM96AQ9H5X1 160 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 VPS45Q9NRW7 570 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 SLAIN2Q9P270 581 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 BCAP29Q9UHQ4 241 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 HERC5Q9UII4 1024 aaKnown RBP6.69□□□□□ -1.34
CCDC6-202ENST00000491922 PCDHGB4Q9UN71 923 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 MINPP1Q9UNW1 487 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 PLLPQ9Y342 182 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 TRIM17Q9Y577 477 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 PCDHGB5Q9Y5G0 923 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 GPC6Q9Y625 555 aaPredicted RBP6.69□□□□□ -1.34
CCDC6-202ENST00000491922 SNCAIPQ9Y6H5 919 aa6.69□□□□□ -1.34
CCDC6-202ENST00000491922 ZBTB5O15062 677 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 GRIN3BO60391 1043 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 CLASP2O75122 1294 aaKnown RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 SPAG6O75602 509 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 TRPA1O75762 1119 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 ESRRBO95718 433 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 KITP10721 976 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 EEF2P13639 858 aaKnown RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 PSMC3P17980 439 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 CD58P19256 250 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 ITGAXP20702 1163 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 CDH3P22223 829 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 CIITAP33076 1130 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 TAS2R40P59535 323 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 FAAP100Q0VG06 881 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 AP3B2Q13367 1082 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 MTMR2Q13614 643 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 SEPT6Q14141 434 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 TCHHL1Q5QJ38 904 aaPredicted RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 TTC39BQ5VTQ0 682 aaPredicted RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 SLC2A7Q6PXP3 512 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 C1orf186Q6ZWK4 172 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 HPS6Q86YV9 775 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 WDR75Q8IWA0 830 aaKnown RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 SEPT12Q8IYM1 358 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 DEFB107AQ8IZN7 70 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 TMEM174Q8WUU8 243 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 NKD2Q969F2 451 aaPredicted RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 EME1Q96AY2 570 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 FIZ1Q96SL8 496 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 NEURL2Q9BR09 285 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 NYXQ9GZU5 481 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 CCDC68Q9H2F9 335 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 TRPC7Q9HCX4 862 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 PALMDQ9NP74 551 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 GPCPD1Q9NPB8 672 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 GINM1Q9NU53 330 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 RAB20Q9NX57 234 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 MKS1Q9NXB0 559 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 MARCOQ9UEW3 520 aaPredicted RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 CNOT11Q9UKZ1 510 aaKnown RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 APOBEC2Q9Y235 224 aaKnown RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 CLEC11AQ9Y240 323 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 PLIN4Q96Q06 1357 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 A0A0B4J269 797 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 GOLGA8SH3BPF8 625 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 GOLGA8MH3BSY2 632 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 LSM1O15116 133 aaKnown RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 FBXO21O94952 628 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 EIF2S1P05198 315 aaKnown RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 C8BP07358 591 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 UNGP13051 313 aaPredicted RBP6.68□□□□□ -1.34
CCDC6-202ENST00000491922 GYS1P13807 737 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 L1CAMP32004 1257 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 RXRGP48443 463 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 CYP4A11Q02928 519 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 ZNF543Q08ER8 600 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 STX3Q13277 289 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 TUBB3Q13509 450 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 ACAP1Q15027 740 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 KCTD21Q4G0X4 260 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 PRR16Q569H4 304 aa6.68□□□□□ -1.34
CCDC6-202ENST00000491922 ZNF362Q5T0B9 420 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms