RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 MRPL44Q9H9J2 332 aaKnown RBP16.35■□□□□ 0.21
SCAMP3-208ENST00000490999 TMEM30AQ9NV96 361 aa16.35■□□□□ 0.21
SCAMP3-208ENST00000490999 HCN2Q9UL51 889 aa16.35■□□□□ 0.21
SCAMP3-208ENST00000490999 RAXQ9Y2V3 346 aa16.35■□□□□ 0.21
SCAMP3-208ENST00000490999 BPTFQ12830 3046 aa16.35■□□□□ 0.21
SCAMP3-208ENST00000490999 IGHV1OR15-9A0A0B4J2B8 117 aa16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 TBC1D3BA6NDS4 549 aa16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 SLC9A3R1O14745 358 aaPredicted RBP16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 RBP5P82980 135 aa16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 POU5F1Q01860 360 aaKnown RBP16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 TAF10Q12962 218 aa16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 BYSLQ13895 437 aaKnown RBP16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 TRIP6Q15654 476 aaKnown RBP16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 VSTM1Q6UX27 236 aa16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 NAXDQ8IW45 347 aa16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 KRI1Q8N9T8 703 aaKnown RBP16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 TRIML1Q8N9V2 468 aa16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 OR5B17Q8NGF7 314 aa16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 CACTINQ8WUQ7 758 aaKnown RBP16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 HNRNPLLQ8WVV9 542 aaKnown RBP16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 PCIF1Q9H4Z3 704 aa16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 CDH9Q9ULB4 789 aa16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 NME7Q9Y5B8 376 aa16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 ADAMTS20P59510 1910 aa16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 PLXND1Q9Y4D7 1925 aa16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 HELZ2Q9BYK8 2649 aaKnown RBP16.34■□□□□ 0.21
SCAMP3-208ENST00000490999 GCNT3O95395 438 aa16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 NDUFV2P19404 249 aa16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 POSTNQ15063 836 aa16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 L1TD1Q5T7N2 865 aaKnown RBP16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 EGFLAMQ63HQ2 1017 aa16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 ETFBKMTQ8IXQ9 262 aa16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 HVCN1Q96D96 273 aa16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 HPDLQ96IR7 371 aa16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 ZFRQ96KR1 1074 aaKnown RBP16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 ACOX2Q99424 681 aa16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 MRPL45Q9BRJ2 306 aaKnown RBP16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 CCDC86Q9H6F5 360 aaKnown RBP16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 DNAAF2Q9NVR5 837 aaKnown RBP16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 RAD54BQ9Y620 910 aa16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 ASH1LQ9NR48 2969 aaKnown RBP16.33■□□□□ 0.2
SCAMP3-208ENST00000490999 A0A1W2PQF6 199 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 PCNX2A6NKB5 2137 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 TRIM66O15016 1216 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 SLC26A4O43511 780 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 TULP3O75386 442 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 IRF1P10914 325 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 PFKLP17858 780 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 TNFRSF4P43489 277 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 MYO1EQ12965 1108 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 ANO4Q32M45 955 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 PLEKHG6Q3KR16 790 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 SLC36A4Q6YBV0 504 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 USP49Q70CQ1 688 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 HS2ST1Q7LGA3 356 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 MARCH9Q86YJ5 346 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 BBS7Q8IWZ6 715 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 RGL4Q8IZJ4 473 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 TERB1Q8NA31 727 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 ADAMTS14Q8WXS8 1223 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 WBP2Q969T9 261 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 ACCSQ96QU6 501 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 STRA6Q9BX79 667 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 TRIM9Q9C026 710 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 ZNF518BQ9C0D4 1074 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 DPEP3Q9H4B8 488 aa16.32■□□□□ 0.2
SCAMP3-208ENST00000490999 A0A0A0MRY4 1105 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 H3BQV1 296 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 COCHO43405 550 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 GJB3O75712 270 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 MAOBP27338 520 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 NOP14P78316 857 aaKnown RBP16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 GAD2Q05329 585 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 GRIK2Q13002 908 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 BTBD8Q5XKL5 378 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 CCNI2Q6ZMN8 369 aaPredicted RBP16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 LIMS2Q7Z4I7 341 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 RABEPKQ7Z6M1 372 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 SYCP3Q8IZU3 236 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 MYCBPAPQ8TBZ2 947 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 LRIG1Q96JA1 1093 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 MMS19Q96T76 1030 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 KIF2CQ99661 725 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 DEC1Q9P2X7 70 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 EXOC7Q9UPT5 735 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 PCDHB9Q9Y5E1 797 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 PI4KAP42356 2102 aa16.31■□□□□ 0.2
SCAMP3-208ENST00000490999 CLDN5O00501 218 aa16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 HOXC11O43248 304 aaPredicted RBP16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 SYPP08247 313 aa16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 WARSP23381 471 aaKnown RBP16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 MAPRE1Q15691 268 aaKnown RBP16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 TDRD10Q5VZ19 366 aaKnown RBP16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 ERICH6BQ5W0A0 696 aa16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 KIAA1324Q6UXG2 1013 aaKnown RBP16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 TRMT11Q7Z4G4 463 aaKnown RBP16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 DDX42Q86XP3 938 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 TMEM25Q86YD3 366 aa16.3■□□□□ 0.2
SCAMP3-208ENST00000490999 CHPFQ8IZ52 775 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms