RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 CCDC166P0CW27 439 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 ALOX15P16050 662 aaPredicted RBP11.94□□□□□ -0.5
PCSK9-202ENST00000490692 POLR2BP30876 1174 aaKnown RBP11.94□□□□□ -0.5
PCSK9-202ENST00000490692 CDH6P55285 790 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 IL1RL1Q01638 556 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 AP3B2Q13367 1082 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 SH3D19Q5HYK7 790 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 C6orf183Q5T699 404 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 POTEAQ6S8J7 498 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 CATSPER1Q8NEC5 780 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 TSPAN14Q8NG11 270 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 ZNF398Q8TD17 642 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 CEP170P1Q96L14 293 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 CCDC68Q9H2F9 335 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 V9GYQ6 96 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 DISP2A7MBM2 1401 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 PRPF4O43172 522 aaKnown RBP eCLIP11.94□□□□□ -0.59e-8■■■■□ 26.3
PCSK9-202ENST00000490692 RAD17O75943 681 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 FDFT1P37268 417 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 ETFBP38117 255 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 OCA2Q04671 838 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 PLEKHG4Q58EX7 1191 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 MCOLN2Q8IZK6 566 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 DCUN1D1Q96GG9 259 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 KLC2Q9H0B6 622 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 ING2Q9H160 280 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 UPF3AQ9H1J1 476 aaKnown RBP11.94□□□□□ -0.5
PCSK9-202ENST00000490692 GID8Q9NWU2 228 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 TMEM150BA6NC51 233 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 AVILO75366 819 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 APBA3O96018 575 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 SPATA31D3P0C874 917 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 TFAMQ00059 246 aaKnown RBP11.94□□□□□ -0.5
PCSK9-202ENST00000490692 RPS6KA2Q15349 733 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 NEDD8Q15843 81 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 FASTKD1Q53R41 847 aaKnown RBP11.94□□□□□ -0.5
PCSK9-202ENST00000490692 SPATA31D4Q6ZUB0 917 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 FBXO33Q7Z6M2 555 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 SLC51AQ86UW1 340 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 IFNEQ86WN2 208 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 CCNYQ8ND76 341 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 JADE3Q92613 823 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 GATA6Q92908 595 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 KCNK4Q9NYG8 393 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 CLEC11AQ9Y240 323 aa11.94□□□□□ -0.5
PCSK9-202ENST00000490692 PARP4Q9UKK3 1724 aaKnown RBP11.94□□□□□ -0.5
PCSK9-202ENST00000490692 FAM86B1E9PN63 330 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 EIF3DO15371 548 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCSK9-202ENST00000490692 NTSR2O95665 410 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 OSBPP22059 807 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 ATICP31939 592 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 ACTR3P61158 418 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 SYDE2Q5VT97 1194 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 CYP2R1Q6VVX0 501 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 NLRX1Q86UT6 975 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 DNAAF3Q8N9W5 541 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 FEZF2Q8TBJ5 459 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 EBF4Q9BQW3 602 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 IL1RL2Q9HB29 575 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 PCDHB2Q9Y5E7 798 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 DCAF8L1A6NGE4 600 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 ALAS1P13196 640 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 PSMC5P62195 406 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 MAPK11Q15759 364 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 GRIK5Q16478 980 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 PERM1Q5SV97 790 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 C16orf86Q6ZW13 317 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 ZBTB33Q86T24 672 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 MMP19Q99542 508 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 RIOX1Q9H6W3 641 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 ACSS2Q9NR19 701 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 GTSE1Q9NYZ3 720 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 RSL24D1Q9UHA3 163 aaKnown RBP11.93□□□□□ -0.5
PCSK9-202ENST00000490692 ATP11BQ9Y2G3 1177 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 A0A0J9YVX5 310 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 SAC3D1A6NKF1 404 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 F8VP50 259 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 LDHAP00338 332 aaKnown RBP11.93□□□□□ -0.5
PCSK9-202ENST00000490692 TFE3P19532 575 aaPredicted RBP11.93□□□□□ -0.5
PCSK9-202ENST00000490692 VCPP55072 806 aaKnown RBP11.93□□□□□ -0.5
PCSK9-202ENST00000490692 GAD2Q05329 585 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 CLEC16AQ2KHT3 1053 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 VWA5B1Q5TIE3 1220 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 PLA2G4FQ68DD2 849 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 SPOCD1Q6ZMY3 1216 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 SLC26A11Q86WA9 606 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 HEATR4Q86WZ0 1026 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 TREML1Q86YW5 311 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 TTC13Q8NBP0 860 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 TMEM35BQ8NCS4 154 aa11.93□□□□□ -0.5
PCSK9-202ENST00000490692 UTP6Q9NYH9 597 aaKnown RBP11.93□□□□□ -0.5
PCSK9-202ENST00000490692 ZNF862O60290 1169 aa11.92□□□□□ -0.5
PCSK9-202ENST00000490692 GRAP2O75791 330 aa11.92□□□□□ -0.5
PCSK9-202ENST00000490692 NUP107P57740 925 aa11.92□□□□□ -0.5
PCSK9-202ENST00000490692 RHBDL3P58872 404 aa11.92□□□□□ -0.5
PCSK9-202ENST00000490692 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
PCSK9-202ENST00000490692 ITGA9Q13797 1035 aa11.92□□□□□ -0.5
PCSK9-202ENST00000490692 RSBN1LQ6PCB5 846 aaPredicted RBP11.92□□□□□ -0.5
PCSK9-202ENST00000490692 GABPB2Q8TAK5 448 aaPredicted RBP11.92□□□□□ -0.5
PCSK9-202ENST00000490692 DEPTORQ8TB45 409 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms