RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 GP1BBP13224 206 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 KRT10P13645 584 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 MAOBP27338 520 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 GATA4P43694 442 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 IFNAR2P48551 515 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 CLDN6P56747 220 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 FAM160A1Q05DH4 1040 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 NTRK3Q16288 839 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 TMEM132AQ24JP5 1023 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 EOGTQ5NDL2 527 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 ERICH1Q86X53 443 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 TPH2Q8IWU9 490 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 OR10T2Q8NGX3 314 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 RHBDD1Q8TEB9 315 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 DNASE2BQ8WZ79 361 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 FGF11Q92914 225 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 MED8Q96G25 268 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 ACAP3Q96P50 834 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 OCSTAMPQ9BR26 566 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 C22orf23Q9BZE7 217 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 TRIM4Q9C037 500 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 LSG1Q9H089 658 aaKnown RBP7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 C2orf40Q9H1Z8 148 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 CDT1Q9H211 546 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 GAREM1Q9H706 876 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 CD93Q9NPY3 652 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 TOPORSQ9NS56 1045 aaPredicted RBP7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 TUBGCP4Q9UGJ1 667 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 MTORP42345 2549 aa7.72□□□□□ -1.17
PDLIM1-203ENST00000490391 ARID1BQ8NFD5 2236 aaPredicted RBP7.71□□□□□ -1.17
PDLIM1-203ENST00000490391 TMEM131Q92545 1883 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 ABLIM1O14639 778 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 TNFSF14O43557 240 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 NFATC1O95644 943 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 CER1O95813 267 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 CYP17A1P05093 508 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 MARCKSP29966 332 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 ADSSP30520 456 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 SLC6A11P48066 632 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 TUFMP49411 452 aaKnown RBP7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 YARSP54577 528 aaKnown RBP7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 RAB15P59190 212 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 CCDC173Q0VFZ6 552 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 NR1H3Q13133 447 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 VEPH1Q14D04 833 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 NECTIN1Q15223 517 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 INF2Q27J81 1249 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 PREPLQ4J6C6 727 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 ATF7IP2Q5U623 682 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 CREB3L3Q68CJ9 461 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 NCAPH2Q6IBW4 605 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 MAEAQ7L5Y9 396 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 RGL4Q8IZJ4 473 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 PGBD3Q8N328 593 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 PHTF2Q8N3S3 785 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 ZNF513Q8N8E2 541 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 PIGOQ8TEQ8 1089 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 GIPC2Q8TF65 315 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 YTHDC1Q96MU7 727 aaKnown RBP7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 SEPT5Q99719 369 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 ARID3AQ99856 593 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 EIF2AK1Q9BQI3 630 aaKnown RBP7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 KIFC3Q9BVG8 833 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 NRSN2Q9GZP1 204 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 PTPRHQ9HD43 1115 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 KCNK4Q9NYG8 393 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 GMIPQ9P107 970 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 HCN2Q9UL51 889 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 PCDHA4Q9UN74 947 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 CYP8B1Q9UNU6 501 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 TNFSF13BQ9Y275 285 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 AKAP9Q99996 3911 aa7.71□□□□□ -1.18
PDLIM1-203ENST00000490391 CELSR1Q9NYQ6 3014 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 RP1L1Q8IWN7 2480 aaPredicted RBP7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 A0A087WWV3 80 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 A0A1B0GTW7 788 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 A0A1W2PQF6 199 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 TRIM66O15016 1216 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 BRINP1O60477 761 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 KAT7O95251 611 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 GNSP15586 552 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 TCF3P15923 654 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 LIG1P18858 919 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 TYMPP19971 482 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 LRPAP1P30533 357 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 HSPA4P34932 840 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 EIF2DP41214 584 aaKnown RBP7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 MATKP42679 507 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 NAMPTP43490 491 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 CDR1P51861 262 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 OSTNP61366 133 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 ZXDBP98169 803 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 DMP1Q13316 513 aaPredicted RBP7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 HLA-BQ31612 363 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 MGAT5BQ3V5L5 792 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 ZC2HC1CQ53FD0 456 aaPredicted RBP7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 NKAPLQ5M9Q1 402 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 TTC22Q5TAA0 569 aa7.7□□□□□ -1.18
PDLIM1-203ENST00000490391 OVOS1Q6IE37 1185 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms