RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 LINC00597Q9H2U6 94 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 GMIPQ9P107 970 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 CPQQ9Y646 472 aa26.46■■□□□ 1.83
HMGN1-217ENST00000489072 OTOGLQ3ZCN5 2332 aa26.45■■□□□ 1.83
HMGN1-217ENST00000489072 HHLA1C9JL84 531 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 TDGF1P13385 188 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 IFNAR2P48551 515 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 UBE2HP62256 183 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 ZNF394Q53GI3 561 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 DGKKQ5KSL6 1271 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 NAIF1Q69YI7 327 aaPredicted RBP26.45■■□□□ 1.82
HMGN1-217ENST00000489072 GPRIN1Q7Z2K8 1008 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 FILIP1Q7Z7B0 1213 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 NELL1Q92832 810 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 ECT2Q9H8V3 914 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 CISHQ9NSE2 258 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 COMMD8Q9NX08 183 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 SMPD4Q9NXE4 827 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 CTNND2Q9UQB3 1225 aa26.45■■□□□ 1.82
HMGN1-217ENST00000489072 ZDHHC11BP0C7U3 371 aa26.44■■□□□ 1.82
HMGN1-217ENST00000489072 TRIM21P19474 475 aaKnown RBP26.44■■□□□ 1.82
HMGN1-217ENST00000489072 PGFP49763 221 aa26.44■■□□□ 1.82
HMGN1-217ENST00000489072 SNX30Q5VWJ9 437 aa26.44■■□□□ 1.82
HMGN1-217ENST00000489072 ZC3H14Q6PJT7 736 aaKnown RBP26.44■■□□□ 1.82
HMGN1-217ENST00000489072 CPA6Q8N4T0 437 aa26.44■■□□□ 1.82
HMGN1-217ENST00000489072 ATP2A3Q93084 1043 aa26.44■■□□□ 1.82
HMGN1-217ENST00000489072 METTL14Q9HCE5 456 aaKnown RBP26.44■■□□□ 1.82
HMGN1-217ENST00000489072 MYOFQ9NZM1 2061 aa26.43■■□□□ 1.82
HMGN1-217ENST00000489072 TRDMT1O14717 391 aaKnown RBP26.43■■□□□ 1.82
HMGN1-217ENST00000489072 COCHO43405 550 aa26.43■■□□□ 1.82
HMGN1-217ENST00000489072 GJA4P35212 333 aa26.43■■□□□ 1.82
HMGN1-217ENST00000489072 SATB1Q01826 763 aa26.43■■□□□ 1.82
HMGN1-217ENST00000489072 TMEM196Q5HYL7 178 aa26.43■■□□□ 1.82
HMGN1-217ENST00000489072 PPP1R26Q5T8A7 1209 aaPredicted RBP26.43■■□□□ 1.82
HMGN1-217ENST00000489072 FSTL4Q6MZW2 842 aa26.43■■□□□ 1.82
HMGN1-217ENST00000489072 FOXR2Q6PJQ5 311 aa26.43■■□□□ 1.82
HMGN1-217ENST00000489072 SPEM1Q8N4L4 309 aa26.43■■□□□ 1.82
HMGN1-217ENST00000489072 SLC4A11Q8NBS3 891 aa26.43■■□□□ 1.82
HMGN1-217ENST00000489072 JAKMIP2Q96AA8 810 aa26.43■■□□□ 1.82
HMGN1-217ENST00000489072 CCSER2Q9H7U1 834 aa26.43■■□□□ 1.82
HMGN1-217ENST00000489072 FBRSL1Q9HCM7 1045 aaKnown RBP26.43■■□□□ 1.82
HMGN1-217ENST00000489072 MBL2P11226 248 aaPredicted RBP26.42■■□□□ 1.82
HMGN1-217ENST00000489072 CCR3P51677 355 aa26.42■■□□□ 1.82
HMGN1-217ENST00000489072 RAD23BP54727 409 aa26.42■■□□□ 1.82
HMGN1-217ENST00000489072 STX17P56962 302 aa26.42■■□□□ 1.82
HMGN1-217ENST00000489072 CCDC40Q4G0X9 1142 aa26.42■■□□□ 1.82
HMGN1-217ENST00000489072 HECTD3Q5T447 861 aa26.42■■□□□ 1.82
HMGN1-217ENST00000489072 ZFRQ96KR1 1074 aaKnown RBP26.42■■□□□ 1.82
HMGN1-217ENST00000489072 HEXIM2Q96MH2 286 aaKnown RBP26.42■■□□□ 1.82
HMGN1-217ENST00000489072 SEMA4AQ9H3S1 761 aa26.42■■□□□ 1.82
HMGN1-217ENST00000489072 C2orf42Q9NWW7 574 aa26.42■■□□□ 1.82
HMGN1-217ENST00000489072 SCAMP3O14828 347 aaKnown RBP26.41■■□□□ 1.82
HMGN1-217ENST00000489072 FMO5P49326 533 aa26.41■■□□□ 1.82
HMGN1-217ENST00000489072 CAMK4Q16566 473 aa26.41■■□□□ 1.82
HMGN1-217ENST00000489072 TTC39CQ8N584 583 aa26.41■■□□□ 1.82
HMGN1-217ENST00000489072 ZBTB44Q8NCP5 570 aa26.41■■□□□ 1.82
HMGN1-217ENST00000489072 TMEM176AQ96HP8 235 aa26.41■■□□□ 1.82
HMGN1-217ENST00000489072 FBXO44Q9H4M3 255 aa26.41■■□□□ 1.82
HMGN1-217ENST00000489072 ZSCAN32Q9NX65 697 aa26.41■■□□□ 1.82
HMGN1-217ENST00000489072 CFAP97Q9P2B7 532 aa26.41■■□□□ 1.82
HMGN1-217ENST00000489072 PCDHGA2Q9Y5H1 932 aa26.41■■□□□ 1.82
HMGN1-217ENST00000489072 BICDL2A1A5D9 508 aa26.4■■□□□ 1.82
HMGN1-217ENST00000489072 LMNAP02545 664 aaKnown RBP26.4■■□□□ 1.82
HMGN1-217ENST00000489072 CXCL12P48061 93 aa26.4■■□□□ 1.82
HMGN1-217ENST00000489072 TUBP50607 506 aa26.4■■□□□ 1.82
HMGN1-217ENST00000489072 GALK1P51570 392 aa26.4■■□□□ 1.82
HMGN1-217ENST00000489072 PAK1Q13153 545 aa26.4■■□□□ 1.82
HMGN1-217ENST00000489072 CUL2Q13617 745 aa26.4■■□□□ 1.82
HMGN1-217ENST00000489072 SYNPOQ8N3V7 929 aa26.4■■□□□ 1.82
HMGN1-217ENST00000489072 DUSP16Q9BY84 665 aa26.4■■□□□ 1.82
HMGN1-217ENST00000489072 PNPLA8Q9NP80 782 aa26.4■■□□□ 1.82
HMGN1-217ENST00000489072 KIAA1468Q9P260 1216 aa26.4■■□□□ 1.82
HMGN1-217ENST00000489072 SPTBN4Q9H254 2564 aa26.39■■□□□ 1.82
HMGN1-217ENST00000489072 CYP26A1O43174 497 aa26.39■■□□□ 1.82
HMGN1-217ENST00000489072 EGFP01133 1207 aa26.39■■□□□ 1.82
HMGN1-217ENST00000489072 ACO1P21399 889 aaKnown RBP26.39■■□□□ 1.82
HMGN1-217ENST00000489072 AMPD2Q01433 879 aa26.39■■□□□ 1.82
HMGN1-217ENST00000489072 GRSF1Q12849 480 aaKnown RBP eCLIP26.39■■□□□ 1.82
HMGN1-217ENST00000489072 LRMPQ12912 555 aa26.39■■□□□ 1.82
HMGN1-217ENST00000489072 PKN3Q6P5Z2 889 aa26.39■■□□□ 1.82
HMGN1-217ENST00000489072 KIAA1958Q8N8K9 716 aa26.39■■□□□ 1.82
HMGN1-217ENST00000489072 P2RY13Q9BPV8 354 aa26.39■■□□□ 1.82
HMGN1-217ENST00000489072 DNAI2Q9GZS0 605 aa26.39■■□□□ 1.82
HMGN1-217ENST00000489072 FAM124BQ9H5Z6 455 aaPredicted RBP26.39■■□□□ 1.82
HMGN1-217ENST00000489072 SCML2Q9UQR0 700 aa26.39■■□□□ 1.82
HMGN1-217ENST00000489072 KIAA1549LQ6ZVL6 1849 aa26.38■■□□□ 1.81
HMGN1-217ENST00000489072 PMM2O15305 246 aa26.38■■□□□ 1.81
HMGN1-217ENST00000489072 LILRB5O75023 590 aa26.38■■□□□ 1.81
HMGN1-217ENST00000489072 NFATC1O95644 943 aa26.38■■□□□ 1.81
HMGN1-217ENST00000489072 ANP32AP39687 249 aaKnown RBP26.38■■□□□ 1.81
HMGN1-217ENST00000489072 GAB4Q2WGN9 574 aa26.38■■□□□ 1.81
HMGN1-217ENST00000489072 DDX42Q86XP3 938 aaKnown RBP eCLIP26.38■■□□□ 1.814e-6■□□□□ 10.9
HMGN1-217ENST00000489072 UBR7Q8N806 425 aa26.38■■□□□ 1.81
HMGN1-217ENST00000489072 TRIML1Q8N9V2 468 aa26.38■■□□□ 1.81
HMGN1-217ENST00000489072 ATRIPQ8WXE1 791 aa26.38■■□□□ 1.81
HMGN1-217ENST00000489072 EZH1Q92800 747 aaPredicted RBP26.38■■□□□ 1.81
HMGN1-217ENST00000489072 FAM126AQ9BYI3 521 aaPredicted RBP26.38■■□□□ 1.81
HMGN1-217ENST00000489072 OSER1Q9NX31 292 aa26.38■■□□□ 1.81
HMGN1-217ENST00000489072 K7ESF4 209 aa26.37■■□□□ 1.81
HMGN1-217ENST00000489072 PAPSS2O95340 614 aaPredicted RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms