RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 ENGASEQ8NFI3 743 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 RPLP0P6Q8NHW5 317 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 OVCA2Q8WZ82 227 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 SEMA4DQ92854 862 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 JAKMIP2Q96AA8 810 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 NT5C1AQ9BXI3 368 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 NIF3L1Q9GZT8 377 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 CCSER2Q9H7U1 834 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 CYP3A43Q9HB55 503 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 TMEM8AQ9HCN3 771 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 CSNK1G1Q9HCP0 422 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 RMND1Q9NWS8 449 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 GMEB2Q9UKD1 530 aa12.64□□□□□ -0.39
CCHCR1-215ENST00000488920 OTOGLQ3ZCN5 2332 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 SLC9A3R1O14745 358 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 SMC2O95347 1197 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 CYP17A1P05093 508 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 FAM200BP0CF97 657 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 EPB41P11171 864 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 TGM1P22735 817 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 CNR2P34972 360 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 OPRD1P41143 372 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 SPEM2Q0P670 501 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 INCA1Q0VD86 236 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 DHCR24Q15392 516 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 GAB4Q2WGN9 574 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 FBXO43Q4G163 708 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 ZNF658Q5TYW1 1059 aaPredicted RBP12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 SNX30Q5VWJ9 437 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 KRT39Q6A163 491 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 ANKRD40Q6AI12 368 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 LAIR1Q6GTX8 287 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 RHBDF2Q6PJF5 856 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 CEP68Q76N32 757 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 CCDC150Q8NCX0 1101 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 WHAMMQ8TF30 809 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 CYFIP2Q96F07 1278 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 GSDMAQ96QA5 445 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 HNRNPABQ99729 332 aaKnown RBP12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 COMMD8Q9NX08 183 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 USP18Q9UMW8 372 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 PCDHA5Q9Y5H7 936 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 DMXL1Q9Y485 3027 aa12.63□□□□□ -0.39
CCHCR1-215ENST00000488920 FANCMQ8IYD8 2048 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 SPTBN4Q9H254 2564 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 FAM92AA1XBS5 289 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 ANTXRLA6NF34 631 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 CILPO75339 1184 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 TBX18O95935 607 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 ZDHHC11BP0C7U3 371 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 TRIM21P19474 475 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 SLC6A11P48066 632 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 PMS1P54277 932 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 SEC13P55735 322 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 MCCD1P59942 119 aaPredicted RBP12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 RSPO4Q2I0M5 234 aaPredicted RBP12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 ZNF394Q53GI3 561 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 ISM2Q6H9L7 571 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 CLEC20AQ6ZU45 233 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 GPRIN1Q7Z2K8 1008 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 DDX42Q86XP3 938 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 GPR161Q8N6U8 529 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 KIAA1958Q8N8K9 716 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 SMARCE1Q969G3 411 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 ZFRQ96KR1 1074 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 HEXIM2Q96MH2 286 aaKnown RBP12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 HHIPQ96QV1 700 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 TSG101Q99816 390 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 NACA2Q9H009 215 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 FBXO44Q9H4M3 255 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 PARD6AQ9NPB6 346 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 RAB20Q9NX57 234 aa12.62□□□□□ -0.39
CCHCR1-215ENST00000488920 OBSL1O75147 1896 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 DCHS1Q96JQ0 3298 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 DENND4CQ5VZ89 1909 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 E2F8A0AVK6 867 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 HHLA1C9JL84 531 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 K7EQS6 105 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 CYP26A1O43174 497 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 STX10O60499 249 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 RETP07949 1114 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 IRF1P10914 325 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 ACO1P21399 889 aaKnown RBP12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 MXI1P50539 228 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 TUBP50607 506 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 MESP2Q0VG99 397 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 DMC1Q14565 340 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 C2orf27AQ580R0 203 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 DCAF17Q5H9S7 520 aaPredicted RBP12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 TCERG1LQ5VWI1 586 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 SYT13Q7L8C5 426 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 SFTPA1Q8IWL2 248 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 FAM160A2Q8N612 972 aaPredicted RBP12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 FBXL13Q8NEE6 735 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 SPATA20Q8TB22 786 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 TATDN2Q93075 761 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 WBP2Q969T9 261 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 ARID3AQ99856 593 aa12.61□□□□□ -0.39
CCHCR1-215ENST00000488920 TLR8Q9NR97 1041 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms