RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 C12orf40Q86WS4 652 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 ADGRG2Q8IZP9 1017 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 MDGA1Q8NFP4 955 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 GOLGA5Q8TBA6 731 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 EDEM2Q9BV94 578 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 PCDHA7Q9UN72 937 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 ASPMQ8IZT6 3477 aa19.57■□□□□ 0.72
HDAC6-231ENST00000488905 GON4LQ3T8J9 2241 aa19.56■□□□□ 0.72
HDAC6-231ENST00000488905 LRRIQ3A6PVS8 624 aaPredicted RBP19.56■□□□□ 0.72
HDAC6-231ENST00000488905 F13A1P00488 732 aa19.56■□□□□ 0.72
HDAC6-231ENST00000488905 ZSCAN22P10073 491 aaPredicted RBP19.56■□□□□ 0.72
HDAC6-231ENST00000488905 ME1P48163 572 aa19.56■□□□□ 0.72
HDAC6-231ENST00000488905 MRPS21P82921 87 aaKnown RBP19.56■□□□□ 0.72
HDAC6-231ENST00000488905 MESP2Q0VG99 397 aa19.56■□□□□ 0.72
HDAC6-231ENST00000488905 CRY1Q16526 586 aa19.56■□□□□ 0.72
HDAC6-231ENST00000488905 USP39Q53GS9 565 aaKnown RBP19.56■□□□□ 0.72
HDAC6-231ENST00000488905 ZNF667Q5HYK9 610 aa19.56■□□□□ 0.72
HDAC6-231ENST00000488905 RNF43Q68DV7 783 aa19.56■□□□□ 0.72
HDAC6-231ENST00000488905 SFTPA1Q8IWL2 248 aa19.56■□□□□ 0.72
HDAC6-231ENST00000488905 GRAMD1CQ8IYS0 662 aa19.56■□□□□ 0.72
HDAC6-231ENST00000488905 CCDC33Q8N5R6 958 aa19.56■□□□□ 0.72
HDAC6-231ENST00000488905 ZFRQ96KR1 1074 aaKnown RBP19.56■□□□□ 0.72
HDAC6-231ENST00000488905 PNKPQ96T60 521 aa19.56■□□□□ 0.72
HDAC6-231ENST00000488905 DMAP1Q9NPF5 467 aaPredicted RBP19.56■□□□□ 0.72
HDAC6-231ENST00000488905 INVSQ9Y283 1065 aa19.56■□□□□ 0.72
HDAC6-231ENST00000488905 COCHO43405 550 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 CAVIN2O95810 425 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 APODP05090 189 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 CHRM1P11229 460 aaPredicted RBP19.55■□□□□ 0.72
HDAC6-231ENST00000488905 ADH5P11766 374 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 SLC6A11P48066 632 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 AP3M2P53677 418 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 SLC5A3P53794 718 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 CDH8P55286 799 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 CLDN10P78369 228 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 NCOA4Q13772 614 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 RHBDF2Q6PJF5 856 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 PARD3BQ8TEW8 1205 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 SNX21Q969T3 373 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 SMARCD1Q96GM5 515 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 TNIP3Q96KP6 325 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 KCNK16Q96T55 309 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 MED10Q9BTT4 135 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 TBC1D14Q9P2M4 693 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 WDFY3Q8IZQ1 3526 aa19.55■□□□□ 0.72
HDAC6-231ENST00000488905 ASCC3Q8N3C0 2202 aaKnown RBP19.54■□□□□ 0.72
HDAC6-231ENST00000488905 E2F8A0AVK6 867 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.54■□□□□ 0.72
HDAC6-231ENST00000488905 TNFRSF10BO14763 440 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 KLRC4O43908 158 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 KAT7O95251 611 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 BCKDHBP21953 392 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 PMLP29590 882 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 TUBP50607 506 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 KDSRQ06136 332 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 HSF5Q4G112 596 aaPredicted RBP19.54■□□□□ 0.72
HDAC6-231ENST00000488905 HECTD3Q5T447 861 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 N4BP2L1Q5TBK1 243 aaPredicted RBP19.54■□□□□ 0.72
HDAC6-231ENST00000488905 TMEM92Q6UXU6 159 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 PAQR9Q6ZVX9 377 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 CEP57L1Q8IYX8 460 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 ALLCQ8N6M5 410 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 IL17RCQ8NAC3 791 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 TXNDC5Q8NBS9 432 aaKnown RBP19.54■□□□□ 0.72
HDAC6-231ENST00000488905 KIAA0895Q8NCT3 520 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 SCAMP5Q8TAC9 235 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 OTUB2Q96DC9 234 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 LSM14BQ9BX40 385 aaKnown RBP19.54■□□□□ 0.72
HDAC6-231ENST00000488905 SDCBP2Q9H190 292 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 ARHGEF4Q9NR80 690 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 KRT82Q9NSB4 513 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 ANGPTL2Q9UKU9 493 aa19.54■□□□□ 0.72
HDAC6-231ENST00000488905 LNP1A1A4G5 178 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 KRT37O76014 449 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 ALDH1A2O94788 518 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 VNN1O95497 513 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 KLF8O95600 359 aaPredicted RBP19.53■□□□□ 0.72
HDAC6-231ENST00000488905 C4BPAP04003 597 aaKnown RBP19.53■□□□□ 0.72
HDAC6-231ENST00000488905 PDIA4P13667 645 aaKnown RBP19.53■□□□□ 0.72
HDAC6-231ENST00000488905 HNRNPLP14866 589 aaKnown RBP eCLIP19.53■□□□□ 0.72
HDAC6-231ENST00000488905 TIE1P35590 1138 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 ST3GAL2Q16842 350 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 LY6G5CQ5SRR4 150 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 SNX30Q5VWJ9 437 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 CYP2U1Q7Z449 544 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 TTC30AQ86WT1 665 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 PHTF2Q8N3S3 785 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 ELMO3Q96BJ8 720 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 CCSER2Q9H7U1 834 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 EXOC1Q9NV70 894 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 DMAC2Q9NW81 257 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 IL37Q9NZH6 218 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 GMIPQ9P107 970 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 SERTAD1Q9UHV2 236 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 SH3BP1Q9Y3L3 701 aa19.53■□□□□ 0.72
HDAC6-231ENST00000488905 FAM92AA1XBS5 289 aa19.52■□□□□ 0.72
HDAC6-231ENST00000488905 SGK1O00141 431 aa19.52■□□□□ 0.72
HDAC6-231ENST00000488905 ACTN4O43707 911 aaKnown RBP19.52■□□□□ 0.72
HDAC6-231ENST00000488905 AP1G2O75843 785 aa19.52■□□□□ 0.72
HDAC6-231ENST00000488905 SLFN14P0C7P3 912 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms