RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 SLC25A11Q02978 314 aaKnown RBP7.25□□□□□ -1.25
PDAP1-203ENST00000488214 SMC1AQ14683 1233 aaKnown RBP7.25□□□□□ -1.25
PDAP1-203ENST00000488214 ELF2Q15723 593 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 C15orf59Q2T9L4 293 aaPredicted RBP7.25□□□□□ -1.25
PDAP1-203ENST00000488214 SMTNL2Q2TAL5 461 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 ODF2Q5BJF6 829 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 EFHC1Q5JVL4 640 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 SDHAF4Q5VUM1 108 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 AADACL2Q6P093 401 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 CC2D1AQ6P1N0 951 aaPredicted RBP7.25□□□□□ -1.25
PDAP1-203ENST00000488214 RSPO2Q6UXX9 243 aaPredicted RBP7.25□□□□□ -1.25
PDAP1-203ENST00000488214 TAS1R1Q7RTX1 841 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 HERC6Q8IVU3 1022 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 FIBCD1Q8N539 461 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 TTC9BQ8N6N2 239 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 FAM172AQ8WUF8 416 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 RXFP2Q8WXD0 754 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 PIK3R5Q8WYR1 880 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 TSC1Q92574 1164 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 NDRG1Q92597 394 aaKnown RBP7.25□□□□□ -1.25
PDAP1-203ENST00000488214 DPF3Q92784 378 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 FUBP3Q96I24 572 aaKnown RBP eCLIP7.25□□□□□ -1.25
PDAP1-203ENST00000488214 CNPY3Q9BT09 278 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 PLVAPQ9BX97 442 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 ZWILCHQ9H900 591 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 CSNK1G1Q9HCP0 422 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 CNGB3Q9NQW8 809 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 AAASQ9NRG9 546 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 ASNSD1Q9NWL6 643 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 SPG21Q9NZD8 308 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 TMEM59LQ9UK28 342 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 SLC4A7Q9Y6M7 1214 aa7.25□□□□□ -1.25
PDAP1-203ENST00000488214 SYNJ2BP-COX16A0A087WUM0 186 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 GOLGA6L10A0A0M3HER8 536 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 LRRD1A4D1F6 860 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 LCHNA4D1U4 455 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 PI4K2BG5E9Z4 385 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 CAPN9O14815 690 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 ADAM12O43184 909 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 SART1O43290 800 aaKnown RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 TLL1O43897 1013 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 SOAT2O75908 522 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 RNF8O76064 485 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 ZBED1O96006 694 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 LTFP02788 710 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 USP17L7P0C7H9 530 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 ATP2A2P16615 1042 aaKnown RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 CTNNB1P35222 781 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 GTF2F1P35269 517 aaKnown RBP eCLIP7.24□□□□□ -1.251e-7■■□□□ 11.4
PDAP1-203ENST00000488214 MAGEA11P43364 429 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 PTPN9P43378 593 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 TERF1P54274 439 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 HTRA4P83105 476 aaPredicted RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 ROR1Q01973 937 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 GPR17Q13304 367 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 MRPL58Q14197 206 aaKnown RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 NAA30Q147X3 362 aaPredicted RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 LLGL1Q15334 1064 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 HADHQ16836 314 aaKnown RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 LONRF2Q1L5Z9 754 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 ERCC6LQ2NKX8 1250 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 MGAT5BQ3V5L5 792 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 CCDC14Q49A88 953 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 RAB6CQ53S08 254 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 RAB41Q5JT25 222 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 SH3PXD2AQ5TCZ1 1133 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 TXNRD3NBQ6F5E7 133 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 C8orf74Q6P047 294 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 RNF19BQ6ZMZ0 732 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 HFE2Q6ZVN8 426 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 ZNF572Q7Z3I7 529 aaPredicted RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 ADAT2Q7Z6V5 191 aaKnown RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 KATNAL2Q8IYT4 538 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 RNF168Q8IYW5 571 aaPredicted RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 DEFB106AQ8N104 65 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 RASGEF1CQ8N431 466 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 ATAD1Q8NBU5 361 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 NOA1Q8NC60 698 aaKnown RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 SPATA4Q8NEY3 305 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 FBXO22Q8NEZ5 403 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 SPPL2BQ8TCT7 592 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 ACTRT1Q8TDG2 376 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 AUTS2Q8WXX7 1259 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 HERVK_113Q902F9 699 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 UBXN4Q92575 508 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 HSPH1Q92598 858 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 ABHD8Q96I13 439 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 RBM41Q96IZ5 413 aaKnown RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 RPGRIP1Q96KN7 1286 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 PEBP4Q96S96 227 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 TBCBQ99426 244 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 AP1M1Q9BXS5 423 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 OXCT2Q9BYC2 517 aaPredicted RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 RAB6CQ9H0N0 254 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 FAM204AQ9H8W3 233 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 PNPLA8Q9NP80 782 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 CHST7Q9NS84 486 aa7.24□□□□□ -1.25
PDAP1-203ENST00000488214 RBM12Q9NTZ6 932 aaKnown RBP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.24□□□□□ -1.25
PDAP1-203ENST00000488214 COX16Q9P0S2 106 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms