RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 H0Y8X5 98 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 BAG4O95429 457 aaKnown RBP12.55□□□□□ -0.4
TRIM56-204ENST00000487252 WASP42768 502 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 SLC7A9P82251 487 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 SPAG1Q07617 926 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 DNAJC3Q13217 504 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 INAVAQ3KP66 663 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 SDHAF4Q5VUM1 108 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 KIAA1614Q5VZ46 1190 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 EGFLAMQ63HQ2 1017 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 TERB1Q8NA31 727 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 TMLHEQ9NVH6 421 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 ARHGAP28Q9P2N2 729 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 DSEQ9UL01 958 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 NAP1L2Q9ULW6 460 aaPredicted RBP12.55□□□□□ -0.4
TRIM56-204ENST00000487252 MAN2B2Q9Y2E5 1009 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 ANKRD6Q9Y2G4 727 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 PCDHB5Q9Y5E4 795 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 SCN1AP35498 2009 aa12.55□□□□□ -0.4
TRIM56-204ENST00000487252 ANO9A1A5B4 782 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 KCNJ18B7U540 433 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 CBX4O00257 560 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 TULP3O75386 442 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 OLFM2O95897 454 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 CXCL8P10145 99 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 MYF5P13349 255 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 ITGB6P18564 788 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 DDIT3P35638 169 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 DEKP35659 375 aaKnown RBP12.54□□□□□ -0.4
TRIM56-204ENST00000487252 GRIA4P48058 902 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 PDE6CP51160 858 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 GUCY2FP51841 1108 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 ILKQ13418 452 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 SEZ6Q53EL9 994 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 C6orf132Q5T0Z8 1188 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 C10orf76Q5T2E6 689 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 CATSPER3Q86XQ3 398 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 FBXL16Q8N461 479 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 FSIP1Q8NA03 581 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 LEO1Q8WVC0 666 aaPredicted RBP12.54□□□□□ -0.4
TRIM56-204ENST00000487252 ZBTB45Q96K62 511 aaPredicted RBP12.54□□□□□ -0.4
TRIM56-204ENST00000487252 IFT74Q96LB3 600 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 MTMR9Q96QG7 549 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 PCED1AQ9H1Q7 454 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 ABCB6Q9NP58 842 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 PAXBP1Q9Y5B6 917 aa12.54□□□□□ -0.4
TRIM56-204ENST00000487252 TP53BP1Q12888 1972 aaPredicted RBP12.54□□□□□ -0.4
TRIM56-204ENST00000487252 PIRO00625 290 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 KCNK3O14649 394 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 HOXC11O43248 304 aaPredicted RBP12.53□□□□□ -0.4
TRIM56-204ENST00000487252 TRAK2O60296 914 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 PRPF40AO75400 957 aaKnown RBP12.53□□□□□ -0.4
TRIM56-204ENST00000487252 ADRB2P07550 413 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 GLDCP23378 1020 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 CTSKP43235 329 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 ERVPABLB-1P60509 514 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 DDR2Q16832 855 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 KCNT1Q5JUK3 1230 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 LY6G5CQ5SRR4 150 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 SPATA1Q5VX52 437 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 XKR5Q6UX68 686 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 HSCBQ8IWL3 235 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 RASEFQ8IZ41 740 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 CHPFQ8IZ52 775 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 DCP1BQ8IZD4 617 aaKnown RBP12.53□□□□□ -0.4
TRIM56-204ENST00000487252 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 KCNE4Q8WWG9 221 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 KIFAP3Q92845 792 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 CNDP2Q96KP4 475 aaKnown RBP12.53□□□□□ -0.4
TRIM56-204ENST00000487252 TCHPQ9BT92 498 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 RNF38Q9H0F5 515 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 POLD4Q9HCU8 107 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 TUFT1Q9NNX1 390 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 DEC1Q9P2X7 70 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 CLCA2Q9UQC9 943 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 RAD54BQ9Y620 910 aa12.53□□□□□ -0.4
TRIM56-204ENST00000487252 ARID1BQ8NFD5 2236 aaPredicted RBP12.52□□□□□ -0.41
TRIM56-204ENST00000487252 ICE1Q9Y2F5 2266 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 A0A1B0GTQ1 180 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 HAX1O00165 279 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 GFRA2O00451 464 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 KLK10O43240 276 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 DFNA5O60443 496 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 MED24O75448 989 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 TOM1L1O75674 476 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 LDOC1O95751 146 aaPredicted RBP12.52□□□□□ -0.41
TRIM56-204ENST00000487252 OXTRP30559 389 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 NPTX2P47972 431 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 TPMTP51580 245 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 RPL10AP62906 217 aaKnown RBP12.52□□□□□ -0.41
TRIM56-204ENST00000487252 SKOR1P84550 965 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 NFKB2Q00653 900 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 GAD2Q05329 585 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 NOLC1Q14978 699 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRIM56-204ENST00000487252 LINC00303Q3SY05 128 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 SDE2Q6IQ49 451 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 KIAA1324Q6UXG2 1013 aaKnown RBP12.52□□□□□ -0.41
TRIM56-204ENST00000487252 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 THEM5Q8N1Q8 247 aa12.52□□□□□ -0.41
TRIM56-204ENST00000487252 TSPAN18Q96SJ8 248 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms