RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 HINFPQ9BQA5 517 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 SRRTQ9BXP5 876 aaKnown RBP18.67■□□□□ 0.58
COL6A1-204ENST00000486023 VPS13AQ96RL7 3174 aa18.67■□□□□ 0.58
COL6A1-204ENST00000486023 COCHO43405 550 aa18.66■□□□□ 0.58
COL6A1-204ENST00000486023 PGFP49763 221 aa18.66■□□□□ 0.58
COL6A1-204ENST00000486023 SLC7A9P82251 487 aa18.66■□□□□ 0.58
COL6A1-204ENST00000486023 PAK1Q13153 545 aa18.66■□□□□ 0.58
COL6A1-204ENST00000486023 PPP2R5DQ14738 602 aa18.66■□□□□ 0.58
COL6A1-204ENST00000486023 TTI2Q6NXR4 508 aa18.66■□□□□ 0.58
COL6A1-204ENST00000486023 SLC4A11Q8NBS3 891 aa18.66■□□□□ 0.58
COL6A1-204ENST00000486023 CEP63Q96MT8 703 aa18.66■□□□□ 0.58
COL6A1-204ENST00000486023 FBXO44Q9H4M3 255 aa18.66■□□□□ 0.58
COL6A1-204ENST00000486023 FBRSL1Q9HCM7 1045 aaKnown RBP18.66■□□□□ 0.58
COL6A1-204ENST00000486023 CSNK1G1Q9HCP0 422 aa18.66■□□□□ 0.58
COL6A1-204ENST00000486023 NUP210Q8TEM1 1887 aaPredicted RBP18.65■□□□□ 0.58
COL6A1-204ENST00000486023 CYP26A1O43174 497 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 OAS1P00973 400 aaKnown RBP18.65■□□□□ 0.58
COL6A1-204ENST00000486023 EGFP01133 1207 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 LMNAP02545 664 aaKnown RBP18.65■□□□□ 0.58
COL6A1-204ENST00000486023 PFKLP17858 780 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 FMO5P49326 533 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 CCR3P51677 355 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 RAD23BP54727 409 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 CUL2Q13617 745 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 ZNF528Q3MIS6 628 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 HEATR6Q6AI08 1181 aaKnown RBP18.65■□□□□ 0.58
COL6A1-204ENST00000486023 FSTL4Q6MZW2 842 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 OVCA2Q8WZ82 227 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 P2RY13Q9BPV8 354 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 TLR8Q9NR97 1041 aaKnown RBP18.65■□□□□ 0.58
COL6A1-204ENST00000486023 COMMD8Q9NX08 183 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 NUDT5Q9UKK9 219 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 SH3BP1Q9Y3L3 701 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 WDR87Q6ZQQ6 2873 aa18.65■□□□□ 0.58
COL6A1-204ENST00000486023 MIA3Q5JRA6 1907 aa18.64■□□□□ 0.58
COL6A1-204ENST00000486023 CACNA1IQ9P0X4 2223 aa18.64■□□□□ 0.57
COL6A1-204ENST00000486023 NFATC1O95644 943 aa18.64■□□□□ 0.57
COL6A1-204ENST00000486023 TBX18O95935 607 aa18.64■□□□□ 0.57
COL6A1-204ENST00000486023 CD19P15391 556 aa18.64■□□□□ 0.57
COL6A1-204ENST00000486023 MCCD1P59942 119 aaPredicted RBP18.64■□□□□ 0.57
COL6A1-204ENST00000486023 CCINQ13939 588 aa18.64■□□□□ 0.57
COL6A1-204ENST00000486023 SPEM1Q8N4L4 309 aa18.64■□□□□ 0.57
COL6A1-204ENST00000486023 TTC39CQ8N584 583 aa18.64■□□□□ 0.57
COL6A1-204ENST00000486023 DUSP16Q9BY84 665 aa18.64■□□□□ 0.57
COL6A1-204ENST00000486023 PRMT8Q9NR22 394 aaPredicted RBP18.64■□□□□ 0.57
COL6A1-204ENST00000486023 C2orf42Q9NWW7 574 aa18.64■□□□□ 0.57
COL6A1-204ENST00000486023 ZSCAN32Q9NX65 697 aa18.64■□□□□ 0.57
COL6A1-204ENST00000486023 IL37Q9NZH6 218 aa18.64■□□□□ 0.57
COL6A1-204ENST00000486023 KIAA1468Q9P260 1216 aa18.64■□□□□ 0.57
COL6A1-204ENST00000486023 TRDMT1O14717 391 aaKnown RBP18.63■□□□□ 0.57
COL6A1-204ENST00000486023 HOXC13P31276 330 aa18.63■□□□□ 0.57
COL6A1-204ENST00000486023 CETN1Q12798 172 aa18.63■□□□□ 0.57
COL6A1-204ENST00000486023 TMEM196Q5HYL7 178 aa18.63■□□□□ 0.57
COL6A1-204ENST00000486023 PPM1KQ8N3J5 372 aa18.63■□□□□ 0.57
COL6A1-204ENST00000486023 CD101Q93033 1021 aa18.63■□□□□ 0.57
COL6A1-204ENST00000486023 EXOC4Q96A65 974 aa18.63■□□□□ 0.57
COL6A1-204ENST00000486023 POLR3BQ9NW08 1133 aaPredicted RBP18.63■□□□□ 0.57
COL6A1-204ENST00000486023 NAGPAQ9UK23 515 aa18.63■□□□□ 0.57
COL6A1-204ENST00000486023 COQ4Q9Y3A0 265 aa18.63■□□□□ 0.57
COL6A1-204ENST00000486023 A0A1W2PQH9 124 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 CHURC1-FNTBB4DL54 471 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 HHLA1C9JL84 531 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 MDM4O15151 490 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 TLR5O60602 858 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 RNF40O75150 1001 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 OLFM2O95897 454 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 FNTBP49356 437 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 SLC8A3P57103 927 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 YWHAEP62258 255 aaKnown RBP18.62■□□□□ 0.57
COL6A1-204ENST00000486023 DMWDQ09019 674 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 GOLGA7BQ2TAP0 167 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 PKN3Q6P5Z2 889 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 RRAGAQ7L523 313 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 ADGRG2Q8IZP9 1017 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 NT5C1BQ96P26 610 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 SEMA4AQ9H3S1 761 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 SCML2Q9UQR0 700 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 PCDHB4Q9Y5E5 795 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 PCDHGA2Q9Y5H1 932 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.62■□□□□ 0.57
COL6A1-204ENST00000486023 COL4A2P08572 1712 aa18.62■□□□□ 0.57
COL6A1-204ENST00000486023 ZNF638Q14966 1978 aaKnown RBP18.61■□□□□ 0.57
COL6A1-204ENST00000486023 FAM92AA1XBS5 289 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 SLC9A3R1O14745 358 aaPredicted RBP18.61■□□□□ 0.57
COL6A1-204ENST00000486023 FGFR1OPO95684 399 aaKnown RBP18.61■□□□□ 0.57
COL6A1-204ENST00000486023 GNA14O95837 355 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 ZDHHC11BP0C7U3 371 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 RARGP13631 454 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 TCF3P15923 654 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 DRD1P21728 446 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 PXNP49023 591 aaPredicted RBP18.61■□□□□ 0.57
COL6A1-204ENST00000486023 NRLP54845 237 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 SEC13P55735 322 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 KCNH2Q12809 1159 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 DHCR24Q15392 516 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 LPAL2Q16609 132 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 SGO2Q562F6 1265 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 C10orf120Q5SQS8 335 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 SNX30Q5VWJ9 437 aa18.61■□□□□ 0.57
COL6A1-204ENST00000486023 TMEM270Q6UE05 265 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms