RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 SLC7A9P82251 487 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 ZNF77Q15935 545 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 MAN2A1Q16706 1144 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 EXOC3L4Q17RC7 722 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 GPRIN1Q7Z2K8 1008 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 RALGPS2Q86X27 583 aaPredicted RBP13.2□□□□□ -0.3
PTCD1-205ENST00000485746 ANKRD52Q8NB46 1076 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 UBA3Q8TBC4 463 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 OSCP1Q8WVF1 389 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 KAT5Q92993 513 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 FAM81BQ96LP2 452 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 RNF38Q9H0F5 515 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 LMAN1LQ9HAT1 526 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 LRRC4Q9HBW1 653 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 PNPLA8Q9NP80 782 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 ANO10Q9NW15 660 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 IL37Q9NZH6 218 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 NAGPAQ9UK23 515 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 TSPAN16Q9UKR8 245 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 SCML2Q9UQR0 700 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 SH3BP1Q9Y3L3 701 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 WNT6Q9Y6F9 365 aa13.2□□□□□ -0.3
PTCD1-205ENST00000485746 A0A1W2PQH9 124 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 KCNJ18B7U540 433 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 HHLA1C9JL84 531 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 ARNTLO00327 626 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 SLC9A3R1O14745 358 aaPredicted RBP13.19□□□□□ -0.3
PTCD1-205ENST00000485746 CYP26A1O43174 497 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 COCHO43405 550 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 LAMTOR5O43504 91 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 OAS1P00973 400 aaKnown RBP13.19□□□□□ -0.3
PTCD1-205ENST00000485746 IRF1P10914 325 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 RALAP11233 206 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 MAGEA9P43362 315 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 MLLT6P55198 1093 aaPredicted RBP13.19□□□□□ -0.3
PTCD1-205ENST00000485746 GCNT1Q02742 428 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 GOLGA8FQ08AF8 430 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 GOLGA8DPQ0D2H9 430 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 BST2Q10589 180 aaKnown RBP13.19□□□□□ -0.3
PTCD1-205ENST00000485746 USP4Q13107 963 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 LRRC32Q14392 662 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 KCNJ12Q14500 433 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 PON2Q15165 354 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 ANGPT1Q15389 498 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 STILQ15468 1287 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 ARHGAP44Q17R89 818 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 VWA3BQ502W6 1294 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 ENOSF1Q7L5Y1 443 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 TADA2BQ86TJ2 420 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 IRF2BP1Q8IU81 584 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 RBBP8NLQ8NC74 664 aaPredicted RBP13.19□□□□□ -0.3
PTCD1-205ENST00000485746 LMO3Q8TAP4 145 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 ATP2A3Q93084 1043 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 MED15Q96RN5 788 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 FAM83CQ9BQN1 747 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 TUBGCP2Q9BSJ2 902 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 UBXN6Q9BZV1 441 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 CCSER2Q9H7U1 834 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 CFAP97Q9P2B7 532 aa13.19□□□□□ -0.3
PTCD1-205ENST00000485746 M0QYV0 167 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 XPO1O14980 1071 aaKnown RBP13.18□□□□□ -0.3
PTCD1-205ENST00000485746 TLR5O60602 858 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 NFATC1O95644 943 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 RARGP13631 454 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 SLC9A1P19634 815 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 BRD2P25440 801 aaKnown RBP13.18□□□□□ -0.3
PTCD1-205ENST00000485746 CTHP32929 405 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 ATP5C1P36542 298 aaKnown RBP13.18□□□□□ -0.3
PTCD1-205ENST00000485746 PLA2G5P39877 138 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 PSEN1P49768 467 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 TUBP50607 506 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 KIF11P52732 1056 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 PDE4CQ08493 712 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 TCF15Q12870 199 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 STX1AQ16623 288 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 C10orf120Q5SQS8 335 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 SNX30Q5VWJ9 437 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 PIGZQ86VD9 579 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 C1orf210Q8IVY1 113 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 ARHGAP18Q8N392 663 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 UBR7Q8N806 425 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 ANKRD20A12PQ8NF67 263 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 ENOX1Q8TC92 643 aaKnown RBP13.18□□□□□ -0.3
PTCD1-205ENST00000485746 LINC00597Q9H2U6 94 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 NDST4Q9H3R1 872 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 ECT2Q9H8V3 914 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 HPS4Q9NQG7 708 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 SAMSN1Q9NSI8 373 aaKnown RBP13.18□□□□□ -0.3
PTCD1-205ENST00000485746 NFE2L3Q9Y4A8 694 aa13.18□□□□□ -0.3
PTCD1-205ENST00000485746 FAM92AA1XBS5 289 aa13.17□□□□□ -0.3
PTCD1-205ENST00000485746 RNF225M0QZC1 329 aaPredicted RBP13.17□□□□□ -0.3
PTCD1-205ENST00000485746 SCAMP3O14828 347 aaKnown RBP13.17□□□□□ -0.3
PTCD1-205ENST00000485746 MED7O43513 233 aa13.17□□□□□ -0.3
PTCD1-205ENST00000485746 ZDHHC11BP0C7U3 371 aa13.17□□□□□ -0.3
PTCD1-205ENST00000485746 SETSIPP0DME0 302 aa13.17□□□□□ -0.3
PTCD1-205ENST00000485746 LCP1P13796 627 aa13.17□□□□□ -0.3
PTCD1-205ENST00000485746 TCF3P15923 654 aa13.17□□□□□ -0.3
PTCD1-205ENST00000485746 CDK11BP21127 795 aaKnown RBP13.17□□□□□ -0.3
PTCD1-205ENST00000485746 TKTL1P51854 596 aa13.17□□□□□ -0.3
PTCD1-205ENST00000485746 NHLH1Q02575 133 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms