RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 GUF1Q8N442 669 aaKnown RBP13.6□□□□□ -0.23
COL21A1-209ENST00000482933 CPA6Q8N4T0 437 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 SLITRK1Q96PX8 696 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 ZNF518BQ9C0D4 1074 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 EPC1Q9H2F5 836 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 SMYD3Q9H7B4 428 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 DUS2Q9NX74 493 aaKnown RBP13.6□□□□□ -0.23
COL21A1-209ENST00000482933 ARHGAP26Q9UNA1 814 aa13.6□□□□□ -0.23
COL21A1-209ENST00000482933 C2orf78A6NCI8 922 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 ZNF840PA6NDX5 716 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 TRDMT1O14717 391 aaKnown RBP13.59□□□□□ -0.23
COL21A1-209ENST00000482933 VNN1O95497 513 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 KRT13P13646 458 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 NR2F2P24468 414 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 VAMP7P51809 220 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 NUCB2P80303 420 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 ENPEPQ07075 957 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 NR1H3Q13133 447 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 SCARA5Q6ZMJ2 495 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 NUP93Q8N1F7 819 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 TTC16Q8NEE8 873 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 RIN3Q8TB24 985 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 SH3RF2Q8TEC5 729 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 ATP2A3Q93084 1043 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 SLC22A12Q96S37 553 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 MED10Q9BTT4 135 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 B3GNT5Q9BYG0 378 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 IMPG2Q9BZV3 1241 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 GOLPH3LQ9H4A5 285 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 ECT2Q9H8V3 914 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 GDPD2Q9HCC8 539 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 NCDNQ9UBB6 729 aa13.59□□□□□ -0.23
COL21A1-209ENST00000482933 RIF1Q5UIP0 2472 aaKnown RBP13.58□□□□□ -0.23
COL21A1-209ENST00000482933 GOLGA6L4A6NEF3 574 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 ATG13O75143 517 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 RTN3O95197 1032 aaPredicted RBP13.58□□□□□ -0.24
COL21A1-209ENST00000482933 ARSAP15289 507 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 DRD1P21728 446 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 GJA4P35212 333 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 PSMC2P35998 433 aaKnown RBP13.58□□□□□ -0.24
COL21A1-209ENST00000482933 PIK3CAP42336 1068 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 RAP1GAPP47736 663 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 TAF10Q12962 218 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 ADAM9Q13443 819 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 TMEM196Q5HYL7 178 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 WDR44Q5JSH3 913 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 Q6ZS52 159 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 RETREG3Q86VR2 466 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 UNC93AQ86WB7 457 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 GPR161Q8N6U8 529 aaKnown RBP13.58□□□□□ -0.24
COL21A1-209ENST00000482933 KIAA1958Q8N8K9 716 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 PDZD8Q8NEN9 1154 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 OVCA2Q8WZ82 227 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 SMARCD1Q96GM5 515 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 RMND1Q9NWS8 449 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 RAB23Q9ULC3 237 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 SMG5Q9UPR3 1016 aaKnown RBP13.58□□□□□ -0.24
COL21A1-209ENST00000482933 MAPK8IP1Q9UQF2 711 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 CFAP54Q96N23 3096 aa13.58□□□□□ -0.24
COL21A1-209ENST00000482933 OTOL1A6NHN0 477 aaPredicted RBP13.57□□□□□ -0.24
COL21A1-209ENST00000482933 CLDN5O00501 218 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 AKAP3O75969 853 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 NFATC1O95644 943 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 ABL1P00519 1130 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 ASS1P00966 412 aaKnown RBP13.57□□□□□ -0.24
COL21A1-209ENST00000482933 HLA-DRAP01903 254 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 JUNDP17535 347 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 YWHAQP27348 245 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 CNR2P34972 360 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 ID4P47928 161 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 CACNA2D1P54289 1103 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 SLC7A9P82251 487 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 IFRD2Q12894 506 aaPredicted RBP13.57□□□□□ -0.24
COL21A1-209ENST00000482933 EML3Q32P44 896 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 FBXO43Q4G163 708 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 FAM35AQ86V20 835 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 LONP2Q86WA8 852 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 FAM186BQ8IYM0 893 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 KIAA2013Q8IYS2 634 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 CCDC150Q8NCX0 1101 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 P2RY13Q9BPV8 354 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 DNAI2Q9GZS0 605 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 SDCBP2Q9H190 292 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 DMAP1Q9NPF5 467 aaPredicted RBP13.57□□□□□ -0.24
COL21A1-209ENST00000482933 COMMD8Q9NX08 183 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 GMEB2Q9UKD1 530 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 WNT6Q9Y6F9 365 aa13.57□□□□□ -0.24
COL21A1-209ENST00000482933 K7ESF4 209 aa13.56□□□□□ -0.24
COL21A1-209ENST00000482933 LEFTY2O00292 366 aa13.56□□□□□ -0.24
COL21A1-209ENST00000482933 OLFM2O95897 454 aa13.56□□□□□ -0.24
COL21A1-209ENST00000482933 AVPP01185 164 aa13.56□□□□□ -0.24
COL21A1-209ENST00000482933 HOXA6P31267 233 aa13.56□□□□□ -0.24
COL21A1-209ENST00000482933 GALK1P51570 392 aa13.56□□□□□ -0.24
COL21A1-209ENST00000482933 GUCA2AQ02747 115 aa13.56□□□□□ -0.24
COL21A1-209ENST00000482933 EDRF1Q3B7T1 1238 aa13.56□□□□□ -0.24
COL21A1-209ENST00000482933 FSTL4Q6MZW2 842 aa13.56□□□□□ -0.24
COL21A1-209ENST00000482933 ACOT1Q86TX2 421 aa13.56□□□□□ -0.24
COL21A1-209ENST00000482933 DDX42Q86XP3 938 aaKnown RBP eCLIP13.56□□□□□ -0.24
COL21A1-209ENST00000482933 CRYBG2Q8N1P7 616 aa13.56□□□□□ -0.24
COL21A1-209ENST00000482933 DCLK2Q8N568 766 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms