RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 CDCA2Q69YH5 1023 aaPredicted RBP7.3□□□□□ -1.24
CLK1-212ENST00000482590 VASNQ6EMK4 673 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 Q6ZUG5 572 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 UBE2R2Q712K3 238 aaPredicted RBP7.3□□□□□ -1.24
CLK1-212ENST00000482590 ARMCX2Q7L311 632 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 TRIM48Q8IWZ4 208 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 PCSK9Q8NBP7 692 aaKnown RBP7.3□□□□□ -1.24
CLK1-212ENST00000482590 C1orf162Q8NEQ5 155 aaPredicted RBP7.3□□□□□ -1.24
CLK1-212ENST00000482590 MAFAQ8NHW3 353 aaPredicted RBP7.3□□□□□ -1.24
CLK1-212ENST00000482590 TRIM43Q96BQ3 446 aaPredicted RBP7.3□□□□□ -1.24
CLK1-212ENST00000482590 CEP95Q96GE4 821 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 FAXDC2Q96IV6 333 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 CDHR1Q96JP9 859 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 CCDC138Q96M89 665 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 SEZ6LQ9BYH1 1024 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 WDR12Q9GZL7 423 aaKnown RBP7.3□□□□□ -1.24
CLK1-212ENST00000482590 ABHD16BQ9H3Z7 469 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 ACAD9Q9H845 621 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 SLC38A10Q9HBR0 1119 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 RAVER2Q9HCJ3 691 aaKnown RBP7.3□□□□□ -1.24
CLK1-212ENST00000482590 DLL4Q9NR61 685 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 TBC1D22BQ9NU19 505 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 NDOR1Q9UHB4 597 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 FBXO10Q9UK96 956 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 SYNPO2Q9UMS6 1093 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 RIPK3Q9Y572 518 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 PRUNE2Q8WUY3 3088 aa7.3□□□□□ -1.24
CLK1-212ENST00000482590 PTPRSQ13332 1948 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 VCANP13611 3396 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 IGKV6D-41A0A0C4DH26 115 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 TSPY2A6NKD2 308 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 A6NNZ2 444 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 TMEM232C9JQI7 657 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 M0R3H8 397 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 TPP1O14773 563 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 ATP2A1O14983 1001 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 KIAA0355O15063 1070 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 DUSP11O75319 330 aaKnown RBP7.29□□□□□ -1.24
CLK1-212ENST00000482590 ZBED1O96006 694 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 KNG1P01042 644 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 HNRNPCP07910 306 aaKnown RBP eCLIP7.29□□□□□ -1.24
CLK1-212ENST00000482590 PABPC1P11940 636 aaKnown RBP7.29□□□□□ -1.24
CLK1-212ENST00000482590 CST5P28325 142 aaPredicted RBP7.29□□□□□ -1.24
CLK1-212ENST00000482590 PPP2R2AP63151 447 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 MPP1Q00013 466 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 PPARAQ07869 468 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 ACVR2BQ13705 512 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 ODF1Q14990 250 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 SMAD2Q15796 467 aaKnown RBP7.29□□□□□ -1.24
CLK1-212ENST00000482590 RETSATQ6NUM9 610 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 MAMDC4Q6UXC1 1216 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 RALYLQ86SE5 291 aaKnown RBP7.29□□□□□ -1.24
CLK1-212ENST00000482590 TBC1D1Q86TI0 1168 aaPredicted RBP7.29□□□□□ -1.24
CLK1-212ENST00000482590 FAM160B2Q86V87 743 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 KIF18BQ86Y91 864 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 RBM12BQ8IXT5 1001 aaKnown RBP7.29□□□□□ -1.24
CLK1-212ENST00000482590 NDUFAF2Q8N183 169 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 GMCL1P1Q8NEA9 526 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 DEPTORQ8TB45 409 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 TRIM63Q969Q1 353 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 GNRHR2Q96P88 292 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 TAAR9Q96RI9 348 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 CDX2Q99626 313 aaPredicted RBP7.29□□□□□ -1.24
CLK1-212ENST00000482590 KRTAP9-8Q9BYQ0 159 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 UNC45AQ9H3U1 944 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 DCTPP1Q9H773 170 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 SEC61A2Q9H9S3 476 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 RNF146Q9NTX7 359 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 MTMR4Q9NYA4 1195 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 RRN3Q9NYV6 651 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 PPARGC1AQ9UBK2 798 aaKnown RBP7.29□□□□□ -1.24
CLK1-212ENST00000482590 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.29□□□□□ -1.24
CLK1-212ENST00000482590 FEZ2Q9UHY8 353 aaPredicted RBP7.29□□□□□ -1.24
CLK1-212ENST00000482590 ING1Q9UK53 422 aaPredicted RBP7.29□□□□□ -1.24
CLK1-212ENST00000482590 STX8Q9UNK0 236 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 SLC4A7Q9Y6M7 1214 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 SCN10AQ9Y5Y9 1956 aa7.29□□□□□ -1.24
CLK1-212ENST00000482590 COL4A4P53420 1690 aaPredicted RBP7.28□□□□□ -1.24
CLK1-212ENST00000482590 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.28□□□□□ -1.24
CLK1-212ENST00000482590 MYADML2A6NDP7 307 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 NCAM2O15394 837 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 FOXS1O43638 330 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 IL33O95760 270 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 SNAI1O95863 264 aaPredicted RBP7.28□□□□□ -1.24
CLK1-212ENST00000482590 ASGR1P07306 291 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 ALAS1P13196 640 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 ITGB8P26012 769 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 SLC1A4P43007 532 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 STT3AP46977 705 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 GABREP78334 506 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 TFAP4Q01664 338 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 PPFIA1Q13136 1202 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 PPIGQ13427 754 aaKnown RBP eCLIP7.28□□□□□ -1.24
CLK1-212ENST00000482590 VPS53Q5VIR6 699 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 SPATA1Q5VX52 437 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 FAAH2Q6GMR7 532 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 NSMFQ6X4W1 530 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 ANKRD33Q7Z3H0 272 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 KLHDC9Q8NEP7 349 aa7.28□□□□□ -1.24
CLK1-212ENST00000482590 CHURC1Q8WUH1 139 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms