RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 ALLCQ8N6M5 410 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 TXNDC5Q8NBS9 432 aaKnown RBP11.01□□□□□ -0.65
DDX39B-220ENST00000482195 SPATA18Q8TC71 538 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 WHAMMQ8TF30 809 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 HMGB4Q8WW32 186 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 RLN3Q8WXF3 142 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 HPDLQ96IR7 371 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 MMS19Q96T76 1030 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 NUSAP1Q9BXS6 441 aaKnown RBP11.01□□□□□ -0.65
DDX39B-220ENST00000482195 ZDHHC4Q9NPG8 344 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 GDAP2Q9NXN4 497 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 SIX4Q9UIU6 781 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 CDH9Q9ULB4 789 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 CPQQ9Y646 472 aa11.01□□□□□ -0.65
DDX39B-220ENST00000482195 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 TCRBV21S2A2A0A5A6 115 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 PRPF6O94906 941 aaKnown RBP11□□□□□ -0.65
DDX39B-220ENST00000482195 CD2BP2O95400 341 aaKnown RBP11□□□□□ -0.65
DDX39B-220ENST00000482195 ADH1CP00326 375 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 CFIP05156 583 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 MBL2P11226 248 aaPredicted RBP11□□□□□ -0.65
DDX39B-220ENST00000482195 STAT6P42226 847 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 IRX4P78413 519 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 LSM11P83369 360 aaKnown RBP eCLIP11□□□□□ -0.651e-13■□□□□ 10
DDX39B-220ENST00000482195 CEBPZQ03701 1054 aaKnown RBP11□□□□□ -0.65
DDX39B-220ENST00000482195 MAPRE1Q15691 268 aaKnown RBP11□□□□□ -0.65
DDX39B-220ENST00000482195 CRY1Q16526 586 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 MDH1BQ5I0G3 518 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 HS2ST1Q7LGA3 356 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 RASSF3Q86WH2 238 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 SFTPA1Q8IWL2 248 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 TMEFF1Q8IYR6 380 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 GPD1LQ8N335 351 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 SPATA17Q96L03 361 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 SCNM1Q9BWG6 230 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 FGFBP2Q9BYJ0 223 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 SNX25Q9H3E2 840 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 ALG2Q9H553 416 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 POLMQ9NP87 494 aaPredicted RBP11□□□□□ -0.65
DDX39B-220ENST00000482195 CRTAC1Q9NQ79 661 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 EHD2Q9NZN4 543 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 CFAP97Q9P2B7 532 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 ZSCAN21Q9Y5A6 473 aaPredicted RBP11□□□□□ -0.65
DDX39B-220ENST00000482195 CLIC4Q9Y696 253 aa11□□□□□ -0.65
DDX39B-220ENST00000482195 WDFY3Q8IZQ1 3526 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 PCNX2A6NKB5 2137 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 F8VP50 259 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 SLC9A3R1O14745 358 aaPredicted RBP10.99□□□□□ -0.65
DDX39B-220ENST00000482195 GABRDO14764 452 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 KAT7O95251 611 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 ADH5P11766 374 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 CEACAM1P13688 526 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 HNRNPLP14866 589 aaKnown RBP eCLIP10.99□□□□□ -0.65
DDX39B-220ENST00000482195 TCF3P15923 654 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 CSRP1P21291 193 aaKnown RBP10.99□□□□□ -0.65
DDX39B-220ENST00000482195 LMO2P25791 158 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 SLC6A11P48066 632 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 ATXN3P54252 364 aaPredicted RBP10.99□□□□□ -0.65
DDX39B-220ENST00000482195 MRPS21P82921 87 aaKnown RBP10.99□□□□□ -0.65
DDX39B-220ENST00000482195 LMAN2Q12907 356 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 ALCAMQ13740 583 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 DHCR24Q15392 516 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 C8orf34Q49A92 452 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 EOGTQ5NDL2 527 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 LYSMD4Q5XG99 296 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 FAM171BQ6P995 826 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 VSTM1Q6UX27 236 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 C12orf40Q86WS4 652 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 OR5B17Q8NGF7 314 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 KBTBD7Q8WVZ9 684 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 ZCCHC14Q8WYQ9 949 aaKnown RBP10.99□□□□□ -0.65
DDX39B-220ENST00000482195 DNAJC19Q96DA6 116 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 CLIC6Q96NY7 704 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 PNKPQ96T60 521 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 GTPBP2Q9BX10 602 aaKnown RBP10.99□□□□□ -0.65
DDX39B-220ENST00000482195 STRA6Q9BX79 667 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 SLC32A1Q9H598 525 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 ARHGEF4Q9NR80 690 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 PANK4Q9NVE7 773 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 INTS13Q9NVM9 706 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 PTPRJQ12913 1337 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 PKD1L2Q7Z442 2459 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 AKAP13Q12802 2813 aa10.99□□□□□ -0.65
DDX39B-220ENST00000482195 ZNF840PA6NDX5 716 aa10.98□□□□□ -0.65
DDX39B-220ENST00000482195 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.98□□□□□ -0.65
DDX39B-220ENST00000482195 SGK1O00141 431 aa10.98□□□□□ -0.65
DDX39B-220ENST00000482195 CDX4O14627 284 aaPredicted RBP10.98□□□□□ -0.65
DDX39B-220ENST00000482195 HYAL3O43820 417 aaPredicted RBP10.98□□□□□ -0.65
DDX39B-220ENST00000482195 DLATP10515 647 aaKnown RBP10.98□□□□□ -0.65
DDX39B-220ENST00000482195 ENGP17813 658 aa10.98□□□□□ -0.65
DDX39B-220ENST00000482195 PFKLP17858 780 aa10.98□□□□□ -0.65
DDX39B-220ENST00000482195 WARSP23381 471 aaKnown RBP10.98□□□□□ -0.65
DDX39B-220ENST00000482195 PTGER3P43115 390 aa10.98□□□□□ -0.65
DDX39B-220ENST00000482195 TNNC1P63316 161 aa10.98□□□□□ -0.65
DDX39B-220ENST00000482195 ZXDBP98169 803 aa10.98□□□□□ -0.65
DDX39B-220ENST00000482195 MESP2Q0VG99 397 aa10.98□□□□□ -0.65
DDX39B-220ENST00000482195 GAB4Q2WGN9 574 aa10.98□□□□□ -0.65
DDX39B-220ENST00000482195 TDRD10Q5VZ19 366 aaKnown RBP10.98□□□□□ -0.65
DDX39B-220ENST00000482195 STXBP4Q6ZWJ1 553 aa10.98□□□□□ -0.65
DDX39B-220ENST00000482195 DDX42Q86XP3 938 aaKnown RBP eCLIP10.98□□□□□ -0.652e-7■■□□□ 13.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms