RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 MMP17Q9ULZ9 603 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 DENND4CQ5VZ89 1909 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 SCN1AP35498 2009 aa7.54□□□□□ -1.2
COL17A1-205ENST00000480127 OBSL1O75147 1896 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 ZNF638Q14966 1978 aaKnown RBP7.53□□□□□ -1.2
COL17A1-205ENST00000480127 NUP205Q92621 2012 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 A0A087X0B3 334 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 C2orf78A6NCI8 922 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 UPK3BL1B0FP48 263 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 UPK3BL2E5RIL1 263 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 F8VP50 259 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 SLC9A3R1O14745 358 aaPredicted RBP7.53□□□□□ -1.2
COL17A1-205ENST00000480127 TNFRSF10BO14763 440 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 CALUO43852 315 aaPredicted RBP7.53□□□□□ -1.2
COL17A1-205ENST00000480127 ATP2C2O75185 946 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 MBL2P11226 248 aaPredicted RBP7.53□□□□□ -1.2
COL17A1-205ENST00000480127 KRT13P13646 458 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 ENGP17813 658 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 WARSP23381 471 aaKnown RBP7.53□□□□□ -1.2
COL17A1-205ENST00000480127 P2RY2P41231 377 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 PTGER3P43115 390 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 MAGEA11P43364 429 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 MAPK8P45983 427 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 SNRPFP62306 86 aaKnown RBP7.53□□□□□ -1.2
COL17A1-205ENST00000480127 ZXDBP98169 803 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 DNM1Q05193 864 aaKnown RBP7.53□□□□□ -1.2
COL17A1-205ENST00000480127 CYP24A1Q07973 514 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 GOLGA8FQ08AF8 430 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 GOLGA8DPQ0D2H9 430 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 LMAN2Q12907 356 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 SEMA3BQ13214 749 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 CCDC142Q17RM4 750 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 KNOP1Q1ED39 458 aaKnown RBP7.53□□□□□ -1.2
COL17A1-205ENST00000480127 SOWAHAQ2M3V2 549 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 CFAP221Q4G0U5 840 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 PEAR1Q5VY43 1037 aaPredicted RBP7.53□□□□□ -1.2
COL17A1-205ENST00000480127 CNNM4Q6P4Q7 775 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 NUDT18Q6ZVK8 323 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 DDX42Q86XP3 938 aaKnown RBP eCLIP7.53□□□□□ -1.2
COL17A1-205ENST00000480127 SYT12Q8IV01 421 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 SFTPA1Q8IWL2 248 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 TMEFF1Q8IYR6 380 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 GRAMD1CQ8IYS0 662 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 ABCA7Q8IZY2 2146 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 PGBD3Q8N328 593 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 SH3RF2Q8TEC5 729 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 FBXO32Q969P5 355 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 JAKMIP2Q96AA8 810 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 PKMYT1Q99640 499 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 C7orf25Q9BPX7 421 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 ELOVL4Q9GZR5 314 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 SLC32A1Q9H598 525 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 FSCN3Q9NQT6 498 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.53□□□□□ -1.2
COL17A1-205ENST00000480127 KBTBD4Q9NVX7 518 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 MBD1Q9UIS9 605 aaPredicted RBP7.53□□□□□ -1.2
COL17A1-205ENST00000480127 SIX4Q9UIU6 781 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 SH3BP1Q9Y3L3 701 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 ANK1P16157 1881 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 ASPMQ8IZT6 3477 aa7.53□□□□□ -1.2
COL17A1-205ENST00000480127 FASNP49327 2511 aaKnown RBP7.52□□□□□ -1.21
COL17A1-205ENST00000480127 PVALEFA0A1B0GWK0 134 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 FRMD3A2A2Y4 597 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 SCAMP3O14828 347 aaKnown RBP7.52□□□□□ -1.21
COL17A1-205ENST00000480127 MAP3K13O43283 966 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 HCRTO43612 131 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 AP1G2O75843 785 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 ALDH1A2O94788 518 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 RTN3O95197 1032 aaPredicted RBP7.52□□□□□ -1.21
COL17A1-205ENST00000480127 ADH1CP00326 375 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 IRF1P10914 325 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 PTPN1P18031 435 aaKnown RBP7.52□□□□□ -1.21
COL17A1-205ENST00000480127 LMO2P25791 158 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 YWHAQP27348 245 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 CASP1P29466 404 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 ATICP31939 592 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 SYKP43405 635 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 PPP3CCP48454 512 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 AP3M2P53677 418 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 WNT7BP56706 349 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 MYL6P60660 151 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 FAM193AP78312 1265 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 SIM1P81133 766 aaPredicted RBP7.52□□□□□ -1.21
COL17A1-205ENST00000480127 MRPS21P82921 87 aaKnown RBP7.52□□□□□ -1.21
COL17A1-205ENST00000480127 MESP2Q0VG99 397 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 CUL4BQ13620 913 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 NCOA4Q13772 614 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 PSMD6Q15008 389 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 MAP7D1Q3KQU3 841 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 PREPLQ4J6C6 727 aaPredicted RBP7.52□□□□□ -1.21
COL17A1-205ENST00000480127 SCARA3Q6AZY7 606 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 SLC23A3Q6PIS1 610 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 SHC4Q6S5L8 630 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 ARMCX6Q7L4S7 300 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 LPCAT2Q7L5N7 544 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 OSTM1Q86WC4 334 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 PROSER1Q86XN7 944 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 ALLCQ8N6M5 410 aa7.52□□□□□ -1.21
COL17A1-205ENST00000480127 IL17RCQ8NAC3 791 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms