RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 LYPLA1O75608 230 aaPredicted RBP14.02□□□□□ -0.17
USP42-206ENST00000479544 LCP1P13796 627 aa14.02□□□□□ -0.17
USP42-206ENST00000479544 PSMC3P17980 439 aa14.02□□□□□ -0.17
USP42-206ENST00000479544 PTGER2P43116 358 aa14.02□□□□□ -0.17
USP42-206ENST00000479544 GPC3P51654 580 aa14.02□□□□□ -0.17
USP42-206ENST00000479544 HDAC4P56524 1084 aa14.02□□□□□ -0.17
USP42-206ENST00000479544 SLC5A9Q2M3M2 681 aa14.02□□□□□ -0.17
USP42-206ENST00000479544 SNRNP48Q6IEG0 339 aaKnown RBP14.02□□□□□ -0.17
USP42-206ENST00000479544 RINLQ6ZS11 566 aa14.02□□□□□ -0.17
USP42-206ENST00000479544 EXOC8Q8IYI6 725 aa14.02□□□□□ -0.17
USP42-206ENST00000479544 ULK2Q8IYT8 1036 aa14.02□□□□□ -0.17
USP42-206ENST00000479544 USP33Q8TEY7 942 aa14.02□□□□□ -0.17
USP42-206ENST00000479544 CDRT15Q96T59 188 aa14.02□□□□□ -0.17
USP42-206ENST00000479544 CYLDQ9NQC7 956 aa14.02□□□□□ -0.17
USP42-206ENST00000479544 TBC1D23Q9NUY8 699 aa14.02□□□□□ -0.17
USP42-206ENST00000479544 FAM208AQ9UK61 1670 aaKnown RBP14.02□□□□□ -0.17
USP42-206ENST00000479544 CAPN8A6NHC0 703 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 FKBP6O75344 327 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 NEK3P51956 506 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 PLIN5Q00G26 463 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 FSTL1Q12841 308 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 N4BP2L1Q5TBK1 243 aaPredicted RBP14.01□□□□□ -0.17
USP42-206ENST00000479544 SLFN11Q7Z7L1 901 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 OR6Y1Q8NGX8 325 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 LRRC4Q9HBW1 653 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 BTBD7Q9P203 1132 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 SHOC2Q9UQ13 582 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 MRPL42Q9Y6G3 142 aaKnown RBP14.01□□□□□ -0.17
USP42-206ENST00000479544 THSD7AQ9UPZ6 1657 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 PHRF1Q9P1Y6 1649 aaKnown RBP14.01□□□□□ -0.17
USP42-206ENST00000479544 NFIBO00712 420 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 AVPR1AP37288 418 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 RAP1GAPP47736 663 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 ZBTB41Q5SVQ8 909 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 PDPK2PQ6A1A2 396 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 NPNTQ6UXI9 565 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 LPCAT2Q7L5N7 544 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 LRRC71Q8N4P6 559 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 PCDH9Q9HC56 1237 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 RPS6KL1Q9Y6S9 549 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 NRAPQ86VF7 1730 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 ARHGEF37A1IGU5 675 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 GOLGA8TH3BQL2 631 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 TMCC1O94876 653 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 SKIV2L2P42285 1042 aaKnown RBP14.01□□□□□ -0.17
USP42-206ENST00000479544 NRLP54845 237 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 PDK3Q15120 406 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 PAK5Q9P286 719 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 PCDHAC2Q9Y5I4 1007 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 ASNSP08243 561 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 LINGO3P0C6S8 592 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 USP10Q14694 798 aaKnown RBP14.01□□□□□ -0.17
USP42-206ENST00000479544 TTC33Q6PID6 262 aaPredicted RBP14.01□□□□□ -0.17
USP42-206ENST00000479544 APOPT1Q96IL0 206 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 MARK4Q96L34 752 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 SIX2Q9NPC8 291 aa14.01□□□□□ -0.17
USP42-206ENST00000479544 ADRA2BP18089 450 aa14□□□□□ -0.17
USP42-206ENST00000479544 ATICP31939 592 aa14□□□□□ -0.17
USP42-206ENST00000479544 MYL6P60660 151 aa14□□□□□ -0.17
USP42-206ENST00000479544 OCA2Q04671 838 aa14□□□□□ -0.17
USP42-206ENST00000479544 PDZD4Q76G19 769 aaPredicted RBP14□□□□□ -0.17
USP42-206ENST00000479544 FAM71AQ8IYT1 594 aa14□□□□□ -0.17
USP42-206ENST00000479544 ABRAQ8N0Z2 381 aa14□□□□□ -0.17
USP42-206ENST00000479544 WDR60Q8WVS4 1066 aa14□□□□□ -0.17
USP42-206ENST00000479544 ZNF395Q9H8N7 513 aaPredicted RBP14□□□□□ -0.17
USP42-206ENST00000479544 A8MXQ7 604 aa14□□□□□ -0.17
USP42-206ENST00000479544 RALBP11234 206 aa14□□□□□ -0.17
USP42-206ENST00000479544 GNL1P36915 607 aaPredicted RBP14□□□□□ -0.17
USP42-206ENST00000479544 MMP14P50281 582 aa14□□□□□ -0.17
USP42-206ENST00000479544 USP46P62068 366 aa14□□□□□ -0.17
USP42-206ENST00000479544 PRKCEQ02156 737 aa14□□□□□ -0.17
USP42-206ENST00000479544 CYP24A1Q07973 514 aa14□□□□□ -0.17
USP42-206ENST00000479544 ATP6V1E2Q96A05 226 aa14□□□□□ -0.17
USP42-206ENST00000479544 AKT1S1Q96B36 256 aa14□□□□□ -0.17
USP42-206ENST00000479544 SNX25Q9H3E2 840 aa14□□□□□ -0.17
USP42-206ENST00000479544 DMAP1Q9NPF5 467 aaPredicted RBP14□□□□□ -0.17
USP42-206ENST00000479544 STX18Q9P2W9 335 aaKnown RBP14□□□□□ -0.17
USP42-206ENST00000479544 ZNF229Q9UJW7 825 aa14□□□□□ -0.17
USP42-206ENST00000479544 DOLKQ9UPQ8 538 aa14□□□□□ -0.17
USP42-206ENST00000479544 VAV1P15498 845 aa14□□□□□ -0.17
USP42-206ENST00000479544 RPL22P35268 128 aaKnown RBP14□□□□□ -0.17
USP42-206ENST00000479544 CDH8P55286 799 aa14□□□□□ -0.17
USP42-206ENST00000479544 TNFAIP1Q13829 316 aa14□□□□□ -0.17
USP42-206ENST00000479544 CLVS1Q8IUQ0 354 aaPredicted RBP14□□□□□ -0.17
USP42-206ENST00000479544 APLFQ8IW19 511 aaPredicted RBP14□□□□□ -0.17
USP42-206ENST00000479544 GALNT15Q8N3T1 639 aa14□□□□□ -0.17
USP42-206ENST00000479544 NRBF2Q96F24 287 aa14□□□□□ -0.17
USP42-206ENST00000479544 CATSPER2Q96P56 530 aa14□□□□□ -0.17
USP42-206ENST00000479544 SIK2Q9H0K1 926 aa14□□□□□ -0.17
USP42-206ENST00000479544 PPCSQ9HAB8 311 aa14□□□□□ -0.17
USP42-206ENST00000479544 SAC3D1A6NKF1 404 aa13.99□□□□□ -0.17
USP42-206ENST00000479544 E2F6O75461 281 aa13.99□□□□□ -0.17
USP42-206ENST00000479544 PDGFRBP09619 1106 aa13.99□□□□□ -0.17
USP42-206ENST00000479544 LIN52Q52LA3 116 aa13.99□□□□□ -0.17
USP42-206ENST00000479544 FAM136AQ96C01 138 aa13.99□□□□□ -0.17
USP42-206ENST00000479544 TRAPPC9Q96Q05 1148 aa13.99□□□□□ -0.17
USP42-206ENST00000479544 RIT2Q99578 217 aa13.99□□□□□ -0.17
USP42-206ENST00000479544 CYP4F12Q9HCS2 524 aa13.99□□□□□ -0.17
USP42-206ENST00000479544 KCND2Q9NZV8 630 aa13.99□□□□□ -0.17
USP42-206ENST00000479544 STXBP5LQ9Y2K9 1186 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms