RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 CALN1Q9BXU9 219 aa18.86■□□□□ 0.61
CCM2-209ENST00000477605 CHMP2BQ9UQN3 213 aa18.86■□□□□ 0.61
CCM2-209ENST00000477605 LCTP09848 1927 aa18.86■□□□□ 0.61
CCM2-209ENST00000477605 KRT19P08727 400 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 GPD1P21695 349 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 EPHB2P29323 1055 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 KYAT1Q16773 422 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 TTC39BQ5VTQ0 682 aaPredicted RBP18.85■□□□□ 0.61
CCM2-209ENST00000477605 C1orf127Q8N9H9 656 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 NSL1Q96IY1 281 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 NUDCD1Q96RS6 583 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 SDCBP2Q9H190 292 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 CDT1Q9H211 546 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 DCLRE1BQ9H816 532 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 TGM2P21980 687 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 GCKP35557 465 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 MAGEA6P43360 314 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 PSMC4P43686 418 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 RAP1GAPP47736 663 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 CDK16Q00536 496 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 ANGEL2Q5VTE6 544 aaKnown RBP18.85■□□□□ 0.61
CCM2-209ENST00000477605 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.85■□□□□ 0.61
CCM2-209ENST00000477605 RFWD2Q8NHY2 731 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 LRRC39Q96DD0 335 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 PTCD3Q96EY7 689 aaKnown RBP18.85■□□□□ 0.61
CCM2-209ENST00000477605 BTBD10Q9BSF8 475 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 ELOVL4Q9GZR5 314 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 ASB7Q9H672 318 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 PRMT7Q9NVM4 692 aaPredicted RBP18.85■□□□□ 0.61
CCM2-209ENST00000477605 CNTN3Q9P232 1028 aa18.85■□□□□ 0.61
CCM2-209ENST00000477605 NKX1-2Q9UD57 310 aaPredicted RBP18.85■□□□□ 0.61
CCM2-209ENST00000477605 WDR91A4D1P6 747 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 KBTBD13C9JR72 458 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 INO80B-WBP1J3KQ70 363 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 MCF2P10911 925 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 CDH6P55285 790 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 FAAP100Q0VG06 881 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 TAF11Q15544 211 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 FAM187BQ17R55 369 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 KBTBD12Q3ZCT8 623 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 BOLA3Q53S33 107 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 CELF3Q5SZQ8 465 aaKnown RBP18.84■□□□□ 0.61
CCM2-209ENST00000477605 FAM102AQ5T9C2 384 aaPredicted RBP18.84■□□□□ 0.61
CCM2-209ENST00000477605 IGDCC3Q8IVU1 814 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 LRRC71Q8N4P6 559 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 FAF2Q96CS3 445 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 NAF1Q96HR8 494 aaKnown RBP18.84■□□□□ 0.61
CCM2-209ENST00000477605 RNF157Q96PX1 679 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 ADAM33Q9BZ11 813 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 INO80BQ9C086 356 aaPredicted RBP18.84■□□□□ 0.61
CCM2-209ENST00000477605 MKS1Q9NXB0 559 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 HEY2Q9UBP5 337 aa18.84■□□□□ 0.61
CCM2-209ENST00000477605 C2CD4BA6NLJ0 364 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 M0QYV0 167 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 KRT37O76014 449 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 EPHX2P34913 555 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 APLP1P51693 650 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 CDH8P55286 799 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 YWHAGP61981 247 aaKnown RBP eCLIP18.83■□□□□ 0.61
CCM2-209ENST00000477605 MBTD1Q05BQ5 628 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 CDK18Q07002 472 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 STILQ15468 1287 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 TMEM132AQ24JP5 1023 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 EEF1DP3Q658K8 133 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 TEKT4Q8WW24 435 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 SKA1Q96BD8 255 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 SERAC1Q96JX3 654 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 MMADHCQ9H3L0 296 aaPredicted RBP18.83■□□□□ 0.61
CCM2-209ENST00000477605 USP29Q9HBJ7 922 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 BTBD7Q9P203 1132 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 DCTN4Q9UJW0 460 aa18.83■□□□□ 0.61
CCM2-209ENST00000477605 BCLAF3A2AJT9 711 aaKnown RBP18.83■□□□□ 0.6
CCM2-209ENST00000477605 ZNF487B1APH4 448 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 GOLGA8RI6L899 631 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 NOP56O00567 594 aaKnown RBP18.83■□□□□ 0.6
CCM2-209ENST00000477605 DPYSL4O14531 572 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 PRPSAP2O60256 369 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 HBP1O60381 514 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 STAU1O95793 577 aaKnown RBP18.83■□□□□ 0.6
CCM2-209ENST00000477605 SNRPAP09012 282 aaKnown RBP18.83■□□□□ 0.6
CCM2-209ENST00000477605 CXCL8P10145 99 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 TAF5Q15542 800 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 LY6KQ17RY6 165 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.83■□□□□ 0.6
CCM2-209ENST00000477605 CXorf38Q8TB03 319 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.83■□□□□ 0.6
CCM2-209ENST00000477605 PTPRN2Q92932 1015 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 PEBP4Q96S96 227 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 TBCBQ99426 244 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 DENND2DQ9H6A0 471 aaPredicted RBP18.83■□□□□ 0.6
CCM2-209ENST00000477605 SMYD3Q9H7B4 428 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 KCNK13Q9HB14 408 aa18.83■□□□□ 0.6
CCM2-209ENST00000477605 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.83■□□□□ 0.6
CCM2-209ENST00000477605 H7C0C1 242 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 ITGBL1O95965 494 aaPredicted RBP18.82■□□□□ 0.6
CCM2-209ENST00000477605 ATP5BP06576 529 aaKnown RBP18.82■□□□□ 0.6
CCM2-209ENST00000477605 DLDP09622 509 aaKnown RBP18.82■□□□□ 0.6
CCM2-209ENST00000477605 PRKCHP24723 683 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 ATP5OP48047 213 aa18.82■□□□□ 0.6
CCM2-209ENST00000477605 SERPINB4P48594 390 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms