RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TNFAIP3P21580 790 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 GSDMDP57764 484 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 USP46P62068 366 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 ITIH3Q06033 890 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 CLEC16AQ2KHT3 1053 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 PUS10Q3MIT2 529 aaKnown RBP16.14■□□□□ 0.17
SEC13-215ENST00000477547 PTPN20Q4JDL3 420 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 GRASPQ7Z6J2 395 aaPredicted RBP16.14■□□□□ 0.17
SEC13-215ENST00000477547 DNAJB7Q7Z6W7 309 aaPredicted RBP16.14■□□□□ 0.17
SEC13-215ENST00000477547 GPR149Q86SP6 731 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 TMC8Q8IU68 726 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 HS6ST3Q8IZP7 471 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 SMRP1Q8NCR6 262 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 MSANTD4Q8NCY6 345 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 SCAMP5Q8TAC9 235 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 KCTD13Q8WZ19 329 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 TRMT2BQ96GJ1 504 aaKnown RBP16.14■□□□□ 0.17
SEC13-215ENST00000477547 GCNAQ96QF7 691 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 PANX2Q96RD6 677 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 PCDHB18PQ96TA0 734 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 TTLL2Q9BWV7 592 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 DEF6Q9H4E7 631 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 SYNCQ9H7C4 482 aa16.14■□□□□ 0.17
SEC13-215ENST00000477547 CLUHO75153 1309 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 C19orf67A6NJJ6 358 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 E5RJQ4 531 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 PIK3R2O00459 728 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 RHOP08100 348 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 MYL4P12829 197 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 LCP1P13796 627 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 PTPN2P17706 415 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 YWHAQP27348 245 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 ACADSBP45954 432 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 NSFP46459 744 aaKnown RBP16.13■□□□□ 0.17
SEC13-215ENST00000477547 TKTL1P51854 596 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 KIF11P52732 1056 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 NTHL1P78549 312 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 CENPCQ03188 943 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 PABPC1LQ4VXU2 614 aaKnown RBP16.13■□□□□ 0.17
SEC13-215ENST00000477547 RAB41Q5JT25 222 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 CYP26C1Q6V0L0 522 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 PDZD4Q76G19 769 aaPredicted RBP16.13■□□□□ 0.17
SEC13-215ENST00000477547 WDTC1Q8N5D0 677 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 LEMD2Q8NC56 503 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 STK32AQ8WU08 396 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 FBXO32Q969P5 355 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 HSFY1Q96LI6 401 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 CPXM1Q96SM3 734 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.13■□□□□ 0.17
SEC13-215ENST00000477547 ULBP1Q9BZM6 244 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 UBXN6Q9BZV1 441 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 ADAM7Q9H2U9 754 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 FBXO44Q9H4M3 255 aa16.13■□□□□ 0.17
SEC13-215ENST00000477547 DNMT3BQ9UBC3 853 aaKnown RBP16.13■□□□□ 0.17
SEC13-215ENST00000477547 UXTQ9UBK9 157 aaPredicted RBP16.13■□□□□ 0.17
SEC13-215ENST00000477547 USP34Q70CQ2 3546 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 SSU72P8A0A1W2PR75 194 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 DDX3XO00571 662 aaKnown RBP eCLIP16.12■□□□□ 0.173e-13■■■□□ 15.6
SEC13-215ENST00000477547 EIF4A3P38919 411 aaKnown RBP16.12■□□□□ 0.17
SEC13-215ENST00000477547 EPHA5P54756 1037 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 CDK17Q00537 523 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 SMAD4Q13485 552 aaKnown RBP16.12■□□□□ 0.17
SEC13-215ENST00000477547 PRSS33Q8NF86 280 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 CPA5Q8WXQ8 436 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 PPP1R13BQ96KQ4 1090 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 MYRFLQ96LU7 910 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 RIPOR3Q96MK2 946 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 SLITRK1Q96PX8 696 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 CHP1Q99653 195 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 C11orf70Q9BRQ4 267 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 SLC4A5Q9BY07 1137 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 S1PR5Q9H228 398 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 CYLDQ9NQC7 956 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 COMMD8Q9NX08 183 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 GMIPQ9P107 970 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 TJP2Q9UDY2 1190 aa16.12■□□□□ 0.17
SEC13-215ENST00000477547 USP15Q9Y4E8 981 aaPredicted RBP16.12■□□□□ 0.17
SEC13-215ENST00000477547 TMCO5BA8MYB1 307 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 TADA3O75528 432 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 GABBR2O75899 941 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 ERBB2P04626 1255 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 UNGP13051 313 aaPredicted RBP16.11■□□□□ 0.17
SEC13-215ENST00000477547 FECHP22830 423 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 GABRR2P28476 465 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 CDC25CP30307 473 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 MTHFRP42898 656 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 TAF10Q12962 218 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 MAPK8IP2Q13387 824 aaPredicted RBP16.11■□□□□ 0.17
SEC13-215ENST00000477547 SLC5A9Q2M3M2 681 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 CYP4A22Q5TCH4 519 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 MMS22LQ6ZRQ5 1243 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 CCDC186Q7Z3E2 898 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 ERICH1Q86X53 443 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 PDZD8Q8NEN9 1154 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 SLC30A5Q8TAD4 765 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 LRRC3Q9BY71 257 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 MIS12Q9H081 205 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 IL21Q9HBE4 155 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 CNGB3Q9NQW8 809 aa16.11■□□□□ 0.17
SEC13-215ENST00000477547 IL37Q9NZH6 218 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms