RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 CUL1Q13616 776 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 NAA30Q147X3 362 aaPredicted RBP13.91□□□□□ -0.18
SEC22A-205ENST00000477063 PTPROQ16827 1216 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 SLC25A52Q3SY17 297 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 CCDC14Q49A88 953 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 PAN2Q504Q3 1202 aaKnown RBP13.91□□□□□ -0.18
SEC22A-205ENST00000477063 VARS2Q5ST30 1063 aaKnown RBP13.91□□□□□ -0.18
SEC22A-205ENST00000477063 PM20D1Q6GTS8 502 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 TMCO3Q6UWJ1 677 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 UBE2Q1Q7Z7E8 422 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 OR10T2Q8NGX3 314 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 SPPL2BQ8TCT7 592 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 NT5C3BQ969T7 300 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 PGAP3Q96FM1 320 aaPredicted RBP13.91□□□□□ -0.18
SEC22A-205ENST00000477063 C8orf48Q96LL4 319 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 SLITRK1Q96PX8 696 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 SLC2A13Q96QE2 648 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 SLC9A7Q96T83 725 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 KRT12Q99456 494 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 RHOXF2Q9BQY4 288 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 LRRC1Q9BTT6 524 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 OSBPL8Q9BZF1 889 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 RC3H2Q9HBD1 1191 aaKnown RBP13.91□□□□□ -0.18
SEC22A-205ENST00000477063 ARFGAP3Q9NP61 516 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 IL23AQ9NPF7 189 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 MARCH5Q9NX47 278 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 EHD2Q9NZN4 543 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 HSFX1Q9UBD0 423 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 PRG3Q9Y2Y8 225 aaPredicted RBP13.91□□□□□ -0.18
SEC22A-205ENST00000477063 USP3Q9Y6I4 520 aa13.91□□□□□ -0.18
SEC22A-205ENST00000477063 VWA8A3KMH1 1905 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 HHLA1C9JL84 531 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 BHMG1C9JSJ3 638 aaPredicted RBP13.9□□□□□ -0.18
SEC22A-205ENST00000477063 NDC80O14777 642 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 GABBR2O75899 941 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 GJB6O95452 261 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 ZBED1O96006 694 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 F9P00740 461 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 KRT1P04264 644 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 LCP1P13796 627 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 LAG3P18627 525 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 IGFBP6P24592 240 aaPredicted RBP13.9□□□□□ -0.18
SEC22A-205ENST00000477063 MIPP30301 263 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 TKTL1P51854 596 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 BCAR1P56945 870 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 MAP3K7CLP57077 242 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 ZNF211Q13398 564 aaPredicted RBP13.9□□□□□ -0.18
SEC22A-205ENST00000477063 CCNG2Q16589 344 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 TCTN1Q2MV58 587 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 FBXO38Q6PIJ6 1188 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 BNIPLQ7Z465 357 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 CCDC50Q8IVM0 306 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 RNF168Q8IYW5 571 aaPredicted RBP13.9□□□□□ -0.18
SEC22A-205ENST00000477063 EMC1Q8N766 993 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 ZMIZ2Q8NF64 920 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 FAM71BQ8TC56 605 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 HASPINQ8TF76 798 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 SEC14L1Q92503 715 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 TSC1Q92574 1164 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 PKNOX2Q96KN3 472 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 TTPALQ9BTX7 342 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 GDF3Q9NR23 364 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 RCOR3Q9P2K3 495 aaPredicted RBP13.9□□□□□ -0.18
SEC22A-205ENST00000477063 MAFFQ9ULX9 164 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 PCDHB5Q9Y5E4 795 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 BACE2Q9Y5Z0 518 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 COL4A6Q14031 1691 aa13.9□□□□□ -0.18
SEC22A-205ENST00000477063 TRIM43BA6NCK2 446 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 I3L4J1 428 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 CLDN5O00501 218 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 TBC1D4O60343 1298 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 ZNF189O75820 626 aaPredicted RBP13.89□□□□□ -0.19
SEC22A-205ENST00000477063 HEXIM1O94992 359 aaKnown RBP13.89□□□□□ -0.19
SEC22A-205ENST00000477063 KDELR1P24390 212 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 PPM1AP35813 382 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 RNASE9P60153 205 aaKnown RBP13.89□□□□□ -0.19
SEC22A-205ENST00000477063 GPR17Q13304 367 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 SIX1Q15475 284 aaPredicted RBP13.89□□□□□ -0.19
SEC22A-205ENST00000477063 USP41Q3LFD5 358 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 CTXN3Q4LDR2 81 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 FAM171A1Q5VUB5 890 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 EMBQ6PCB8 327 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 SPOCD1Q6ZMY3 1216 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 ARHGAP18Q8N392 663 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 ARFGAP1Q8N6T3 406 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 PRELID2Q8N945 189 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 CCHCR1Q8TD31 782 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 FAM172AQ8WUF8 416 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 TRIM43Q96BQ3 446 aaPredicted RBP13.89□□□□□ -0.19
SEC22A-205ENST00000477063 VWCEQ96DN2 955 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 PNKPQ96T60 521 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 LPIN3Q9BQK8 851 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 AP1M1Q9BXS5 423 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 FBXO44Q9H4M3 255 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 CWH43Q9H720 699 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 FAM114A2Q9NRY5 505 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 SMARCAL1Q9NZC9 954 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 PRKAG2Q9UGJ0 569 aa13.89□□□□□ -0.19
SEC22A-205ENST00000477063 UTP11Q9Y3A2 253 aaKnown RBP13.89□□□□□ -0.19
SEC22A-205ENST00000477063 hCG_1818297A0A087WSY0 165 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms