RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 GPR17Q13304 367 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 SH3PXD2AQ5TCZ1 1133 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 HERC6Q8IVU3 1022 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 SCN4BQ8IWT1 228 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 ATAD1Q8NBU5 361 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 SPATA4Q8NEY3 305 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 FBXO22Q8NEZ5 403 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 DPF3Q92784 378 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 GOLGA1Q92805 767 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 RPGRIP1Q96KN7 1286 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 SLC9A7Q96T83 725 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 LBHD1Q9BQE6 289 aaPredicted RBP30.23■■■□□ 2.43
VEGFA-211ENST00000476772 MTMR11A4FU01 709 aa30.22■■■□□ 2.43
VEGFA-211ENST00000476772 C2CD2LO14523 706 aa30.22■■■□□ 2.43
VEGFA-211ENST00000476772 RNF8O76064 485 aa30.22■■■□□ 2.43
VEGFA-211ENST00000476772 CDO1Q16878 200 aa30.22■■■□□ 2.43
VEGFA-211ENST00000476772 TEX35Q5T0J7 233 aa30.22■■■□□ 2.43
VEGFA-211ENST00000476772 SEL1L2Q5TEA6 688 aa30.22■■■□□ 2.43
VEGFA-211ENST00000476772 TXNRD3NBQ6F5E7 133 aa30.22■■■□□ 2.43
VEGFA-211ENST00000476772 VSTM1Q6UX27 236 aa30.22■■■□□ 2.43
VEGFA-211ENST00000476772 RSRC2Q7L4I2 434 aaKnown RBP30.22■■■□□ 2.43
VEGFA-211ENST00000476772 TTC9BQ8N6N2 239 aa30.22■■■□□ 2.43
VEGFA-211ENST00000476772 AAASQ9NRG9 546 aa30.22■■■□□ 2.43
VEGFA-211ENST00000476772 TTC7AQ9ULT0 858 aaPredicted RBP30.22■■■□□ 2.43
VEGFA-211ENST00000476772 BACE2Q9Y5Z0 518 aa30.22■■■□□ 2.43
VEGFA-211ENST00000476772 ADAM12O43184 909 aa30.21■■■□□ 2.43
VEGFA-211ENST00000476772 LINC00271P0C7V0 271 aa30.21■■■□□ 2.43
VEGFA-211ENST00000476772 RPL17P18621 184 aaKnown RBP30.21■■■□□ 2.43
VEGFA-211ENST00000476772 ATP11AP98196 1134 aa30.21■■■□□ 2.43
VEGFA-211ENST00000476772 SLC25A11Q02978 314 aaKnown RBP30.21■■■□□ 2.43
VEGFA-211ENST00000476772 RAB6CQ53S08 254 aa30.21■■■□□ 2.43
VEGFA-211ENST00000476772 LRRC38Q5VT99 294 aa30.21■■■□□ 2.43
VEGFA-211ENST00000476772 RNF19BQ6ZMZ0 732 aa30.21■■■□□ 2.43
VEGFA-211ENST00000476772 KATNAL2Q8IYT4 538 aa30.21■■■□□ 2.43
VEGFA-211ENST00000476772 NOA1Q8NC60 698 aaKnown RBP30.21■■■□□ 2.43
VEGFA-211ENST00000476772 RAB6CQ9H0N0 254 aa30.21■■■□□ 2.43
VEGFA-211ENST00000476772 DAB1O75553 588 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 VNN2O95498 520 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 ZBED1O96006 694 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 FGGP02679 453 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 PPM1AP35813 382 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 MAGEA11P43364 429 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 GLUD2P49448 558 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 GPR15P49685 360 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 DSG1Q02413 1049 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 ATP13A4Q4VNC1 1196 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 SLC8B1Q6J4K2 584 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 HFE2Q6ZVN8 426 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 DDX53Q86TM3 631 aaKnown RBP30.2■■■□□ 2.43
VEGFA-211ENST00000476772 TSC1Q92574 1164 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP30.2■■■□□ 2.434e-6■□□□□ 10.5
VEGFA-211ENST00000476772 PCDHB12Q9Y5F1 795 aa30.2■■■□□ 2.43
VEGFA-211ENST00000476772 YJEFN3A6XGL0 299 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 E7ENQ6 273 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 GLI1P08151 1106 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 ATP2A2P16615 1042 aaKnown RBP30.2■■■□□ 2.42
VEGFA-211ENST00000476772 MIPP30301 263 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 PTPN9P43378 593 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 SLC5A3P53794 718 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 YWHAZP63104 245 aaKnown RBP30.2■■■□□ 2.42
VEGFA-211ENST00000476772 ITIH3Q06033 890 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 ERCC6LQ2NKX8 1250 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 BHLHA9Q7RTU4 235 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 DEFB106AQ8N104 65 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 SPPL2BQ8TCT7 592 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 ABHD8Q96I13 439 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 DDX23Q9BUQ8 820 aaKnown RBP30.2■■■□□ 2.42
VEGFA-211ENST00000476772 KLHL11Q9NVR0 708 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 USP3Q9Y6I4 520 aa30.2■■■□□ 2.42
VEGFA-211ENST00000476772 TNFRSF10BO14763 440 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 TRIM66O15016 1216 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 SART1O43290 800 aaKnown RBP30.19■■■□□ 2.42
VEGFA-211ENST00000476772 TFE3P19532 575 aaPredicted RBP30.19■■■□□ 2.42
VEGFA-211ENST00000476772 IL1R2P27930 398 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 PCK1P35558 622 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 ROR1Q01973 937 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 SMARCB1Q12824 385 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 DDR2Q16832 855 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 HADHQ16836 314 aaKnown RBP30.19■■■□□ 2.42
VEGFA-211ENST00000476772 SDHAF4Q5VUM1 108 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 SCAMP5Q8TAC9 235 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 PHOSPHO2Q8TCD6 241 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 FAM172AQ8WUF8 416 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 UBXN4Q92575 508 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 C8orf48Q96LL4 319 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 RAD9AQ99638 391 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 C11orf84Q9BUA3 381 aaPredicted RBP30.19■■■□□ 2.42
VEGFA-211ENST00000476772 CRISPLD1Q9H336 500 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 ZWILCHQ9H900 591 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 NGRNQ9NPE2 291 aaKnown RBP30.19■■■□□ 2.42
VEGFA-211ENST00000476772 RBM12Q9NTZ6 932 aaKnown RBP30.19■■■□□ 2.42
VEGFA-211ENST00000476772 PCSK1NQ9UHG2 260 aa30.19■■■□□ 2.42
VEGFA-211ENST00000476772 WDR27A2RRH5 827 aa30.18■■■□□ 2.42
VEGFA-211ENST00000476772 OR1D2P34982 312 aa30.18■■■□□ 2.42
VEGFA-211ENST00000476772 MATKP42679 507 aa30.18■■■□□ 2.42
VEGFA-211ENST00000476772 LONRF2Q1L5Z9 754 aa30.18■■■□□ 2.42
VEGFA-211ENST00000476772 PM20D1Q6GTS8 502 aa30.18■■■□□ 2.42
VEGFA-211ENST00000476772 POLNQ7Z5Q5 900 aa30.18■■■□□ 2.42
VEGFA-211ENST00000476772 SLC2A13Q96QE2 648 aa30.18■■■□□ 2.42
VEGFA-211ENST00000476772 ADAM33Q9BZ11 813 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms