RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 IFNAR2P48551 515 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 SLC5A3P53794 718 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 PMS1P54277 932 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 CSTF1Q05048 431 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 TAF10Q12962 218 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 FZD5Q13467 585 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 RUNX3Q13761 415 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 WDR44Q5JSH3 913 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 DGKKQ5KSL6 1271 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 ANKRD40Q6AI12 368 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 TRIM68Q6AZZ1 485 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 ISM2Q6H9L7 571 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 ZNF687Q8N1G0 1237 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 CPA6Q8N4T0 437 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 OSCP1Q8WVF1 389 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 ATRIPQ8WXE1 791 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 SECISBP2LQ93073 1101 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 FBXO32Q969P5 355 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 EXOC4Q96A65 974 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 SLC22A12Q96S37 553 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 CYP2S1Q96SQ9 504 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 KCNK16Q96T55 309 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 FAM83CQ9BQN1 747 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 EBF3Q9H4W6 596 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 FAM124BQ9H5Z6 455 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 LMAN1LQ9HAT1 526 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 APOBEC3GQ9HC16 384 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 METTL14Q9HCE5 456 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 HPS4Q9NQG7 708 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 GKN1Q9NS71 199 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 FAM49BQ9NUQ9 324 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 COMMD8Q9NX08 183 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 RAB20Q9NX57 234 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 DUS2Q9NX74 493 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 CHMP5Q9NZZ3 219 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 ARMCX3Q9UH62 379 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 RALYQ9UKM9 306 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 USP18Q9UMW8 372 aa12.07□□□□□ -0.48
NUDCD3-206ENST00000475952 DSPP15924 2871 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 CEP192Q8TEP8 1941 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 BICDL2A1A5D9 508 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 CILPO75339 1184 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 OLFM2O95897 454 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 OAS1P00973 400 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 FAM200BP0CF97 657 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 CHRNB1P11230 501 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 ADORA2BP29275 332 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 CCR3P51677 355 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 UBE2HP62256 183 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 MTAPQ13126 283 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 PON2Q15165 354 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 KLHL10Q6JEL2 608 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 TXNDC11Q6PKC3 985 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 PAQR9Q6ZVX9 377 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 C12orf29Q8N999 325 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 RIN3Q8TB24 985 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 SH3RF2Q8TEC5 729 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 ATP2A3Q93084 1043 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 CEP63Q96MT8 703 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 TWNKQ96RR1 684 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 FBXO44Q9H4M3 255 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 PRMT8Q9NR22 394 aaPredicted RBP12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 ZSCAN32Q9NX65 697 aa12.06□□□□□ -0.48
NUDCD3-206ENST00000475952 IGF2RP11717 2491 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 NFATC1O95644 943 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 MBL2P11226 248 aaPredicted RBP12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 MAP3K7CLP57077 242 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 SLC7A9P82251 487 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 MORC3Q14149 939 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 CCDC40Q4G0X9 1142 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 CBWD6Q4V339 395 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 PPM1JQ5JR12 505 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 CBWD3Q5JTY5 395 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 CBWD5Q5RIA9 395 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 FOXR2Q6PJQ5 311 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 TSSK4Q6SA08 328 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 CLEC20AQ6ZU45 233 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 DDX42Q86XP3 938 aaKnown RBP eCLIP12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 SYNPOQ8N3V7 929 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 KIAA1958Q8N8K9 716 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 TRIML1Q8N9V2 468 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 SLC35C1Q96A29 364 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 CYFIP2Q96F07 1278 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 HNRNPABQ99729 332 aaKnown RBP12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 SMOQ99835 787 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 FAM126AQ9BYI3 521 aaPredicted RBP12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 ECT2Q9H8V3 914 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 CSNK1G1Q9HCP0 422 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 PNPLA8Q9NP80 782 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 CISHQ9NSE2 258 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 CTNND2Q9UQB3 1225 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 CPQQ9Y646 472 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 WNT6Q9Y6F9 365 aa12.05□□□□□ -0.48
NUDCD3-206ENST00000475952 NUP205Q92621 2012 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 AKAP13Q12802 2813 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 FAM92AA1XBS5 289 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 LEFTY2O00292 366 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 BIN1O00499 593 aa12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 SLC9A3R1O14745 358 aaPredicted RBP12.04□□□□□ -0.48
NUDCD3-206ENST00000475952 TNFRSF10BO14763 440 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms