RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 PDE11AQ9HCR9 933 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 ABCB6Q9NP58 842 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 CRTAC1Q9NQ79 661 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 DUS2Q9NX74 493 aaKnown RBP11.18□□□□□ -0.62
CALD1-217ENST00000475772 SMC3Q9UQE7 1217 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 INVSQ9Y283 1065 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 SNX9Q9Y5X1 595 aa11.18□□□□□ -0.62
CALD1-217ENST00000475772 PTPRJQ12913 1337 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 TNRC6BQ9UPQ9 1833 aaKnown RBP11.17□□□□□ -0.62
CALD1-217ENST00000475772 A0A087X0B3 334 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 FRMD3A2A2Y4 597 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 BCLAF3A2AJT9 711 aaKnown RBP11.17□□□□□ -0.62
CALD1-217ENST00000475772 GIPC1O14908 333 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 HUS1O60921 280 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 PRPF6O94906 941 aaKnown RBP11.17□□□□□ -0.62
CALD1-217ENST00000475772 BMP15O95972 392 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 USP17L7P0C7H9 530 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 HNRNPLP14866 589 aaKnown RBP eCLIP11.17□□□□□ -0.62
CALD1-217ENST00000475772 GARTP22102 1010 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 RPL10AP62906 217 aaKnown RBP11.17□□□□□ -0.62
CALD1-217ENST00000475772 AMPD2Q01433 879 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 MESP2Q0VG99 397 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 LMBRD2Q68DH5 695 aaPredicted RBP11.17□□□□□ -0.62
CALD1-217ENST00000475772 CC2D1AQ6P1N0 951 aaPredicted RBP11.17□□□□□ -0.62
CALD1-217ENST00000475772 FAM173BQ6P4H8 233 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 CYP2U1Q7Z449 544 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 BRAPQ7Z569 592 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 SFTPA1Q8IWL2 248 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 TOP6BLQ8N6T0 577 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 LRRC52Q8N7C0 313 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 GLIS3Q8NEA6 775 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 OR5B17Q8NGF7 314 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 SH3RF2Q8TEC5 729 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 USP33Q8TEY7 942 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 CACTINQ8WUQ7 758 aaKnown RBP11.17□□□□□ -0.62
CALD1-217ENST00000475772 CALR3Q96L12 384 aaKnown RBP11.17□□□□□ -0.62
CALD1-217ENST00000475772 RNF38Q9H0F5 515 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 TMEM206Q9H813 350 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 TRPC7Q9HCX4 862 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 VPS45Q9NRW7 570 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 RBAKQ9NYW8 714 aaPredicted RBP11.17□□□□□ -0.62
CALD1-217ENST00000475772 UXTQ9UBK9 157 aaPredicted RBP11.17□□□□□ -0.62
CALD1-217ENST00000475772 SEL1LQ9UBV2 794 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 STK17AQ9UEE5 414 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 ANGPTL2Q9UKU9 493 aa11.17□□□□□ -0.62
CALD1-217ENST00000475772 SRPRBQ9Y5M8 271 aaKnown RBP11.17□□□□□ -0.62
CALD1-217ENST00000475772 ADAMTS9Q9P2N4 1935 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 TRAV19A0A0A6YYK7 116 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 CDX4O14627 284 aaPredicted RBP11.16□□□□□ -0.62
CALD1-217ENST00000475772 GCNT3O95395 438 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 APBB3O95704 486 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 LDHAP00338 332 aaKnown RBP11.16□□□□□ -0.62
CALD1-217ENST00000475772 CST3P01034 146 aaPredicted RBP11.16□□□□□ -0.62
CALD1-217ENST00000475772 HDCP19113 662 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 BCKDHBP21953 392 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 CTSOP43234 321 aaPredicted RBP11.16□□□□□ -0.62
CALD1-217ENST00000475772 MAGEA11P43364 429 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 LHX1P48742 406 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 RBP5P82980 135 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 MYL7Q01449 175 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 RNF43Q68DV7 783 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 SV2BQ7L1I2 683 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 DPH6Q7L8W6 267 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 RASSF3Q86WH2 238 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 SPATA2LQ8IUW3 424 aaPredicted RBP11.16□□□□□ -0.62
CALD1-217ENST00000475772 SCN4BQ8IWT1 228 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 ADGRF2Q8IZF7 708 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 ADGRG2Q8IZP9 1017 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 CPA6Q8N4T0 437 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 RASSF8Q8NHQ8 419 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 SPATA18Q8TC71 538 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 FUBP3Q96I24 572 aaKnown RBP eCLIP11.16□□□□□ -0.62
CALD1-217ENST00000475772 INSM2Q96T92 566 aaPredicted RBP11.16□□□□□ -0.62
CALD1-217ENST00000475772 PANK2Q9BZ23 570 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 MTMR12Q9C0I1 747 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 OLFML3Q9NRN5 406 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 INTS13Q9NVM9 706 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 RALYQ9UKM9 306 aaKnown RBP11.16□□□□□ -0.62
CALD1-217ENST00000475772 ITGA11Q9UKX5 1188 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 ARHGAP26Q9UNA1 814 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 EXOC7Q9UPT5 735 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 WASF3Q9UPY6 502 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 ZZEF1O43149 2961 aa11.16□□□□□ -0.62
CALD1-217ENST00000475772 C4orf47A7E2U8 309 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 PATE3B3GLJ2 98 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 LEFTY2O00292 366 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 LZTS3O60299 673 aaPredicted RBP11.15□□□□□ -0.62
CALD1-217ENST00000475772 RHOBTB1O94844 696 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 CAVIN2O95810 425 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 KRT19P08727 400 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 GAP43P17677 238 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 BDNFP23560 247 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 HOXD13P35453 343 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 SLC6A11P48066 632 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 IFNAR2P48551 515 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 DGKEP52429 567 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 PSMC1P62191 440 aaKnown RBP11.15□□□□□ -0.62
CALD1-217ENST00000475772 CREB5Q02930 508 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 PSMD2Q13200 908 aa11.15□□□□□ -0.62
CALD1-217ENST00000475772 CUL4AQ13619 759 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms