RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 METTL12A8MUP2 240 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 BRINP1O60477 761 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 CYP2F1P24903 491 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 ADSSP30520 456 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 MATR3P43243 847 aaKnown RBP eCLIP11.28□□□□□ -0.6
SSBP1-209ENST00000473783 TAF6P49848 677 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 CCT8P50990 548 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 AFF3P51826 1226 aaKnown RBP11.28□□□□□ -0.6
SSBP1-209ENST00000473783 GAD2Q05329 585 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 TARDBPQ13148 414 aaKnown RBP eCLIP11.28□□□□□ -0.6
SSBP1-209ENST00000473783 NR5A1Q13285 461 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 NUMA1Q14980 2115 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 ENOX2Q16206 610 aaKnown RBP11.28□□□□□ -0.6
SSBP1-209ENST00000473783 LY6G5CQ5SRR4 150 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 DCAF12L1Q5VU92 463 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 BTBD8Q5XKL5 378 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 EGFLAMQ63HQ2 1017 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 HAUS3Q68CZ6 603 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 KIAA1324Q6UXG2 1013 aaKnown RBP11.28□□□□□ -0.6
SSBP1-209ENST00000473783 MIB1Q86YT6 1006 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 CD302Q8IX05 232 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 CHPFQ8IZ52 775 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 ZNF248Q8NDW4 579 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 C1orf216Q8TAB5 229 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 TNFRSF25Q93038 417 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 IGSF8Q969P0 613 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 OTUB2Q96DC9 234 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 GPR174Q9BXC1 333 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 USP36Q9P275 1121 aaKnown RBP11.28□□□□□ -0.6
SSBP1-209ENST00000473783 HCN2Q9UL51 889 aa11.28□□□□□ -0.6
SSBP1-209ENST00000473783 E2F8A0AVK6 867 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 SLC16A4O15374 487 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 HOXC11O43248 304 aaPredicted RBP11.27□□□□□ -0.61
SSBP1-209ENST00000473783 PAPSS1O43252 624 aaPredicted RBP11.27□□□□□ -0.61
SSBP1-209ENST00000473783 HIP1RO75146 1068 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 TULP3O75386 442 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 RFPL3O75679 317 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 OLFM2O95897 454 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 KRT2P35908 639 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 KIF19Q2TAC6 998 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 CFAP221Q4G0U5 840 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 ARHGAP40Q5TG30 622 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 HES3Q5TGS1 186 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 JADE1Q6IE81 842 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 DDX42Q86XP3 938 aaKnown RBP eCLIP11.27□□□□□ -0.61
SSBP1-209ENST00000473783 SNRNP27Q8WVK2 155 aaKnown RBP11.27□□□□□ -0.61
SSBP1-209ENST00000473783 ZNF274Q96GC6 653 aaPredicted RBP11.27□□□□□ -0.61
SSBP1-209ENST00000473783 NTPCRQ9BSD7 190 aaKnown RBP11.27□□□□□ -0.61
SSBP1-209ENST00000473783 HAPLN2Q9GZV7 340 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 SLC6A17Q9H1V8 727 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 BRMS1Q9HCU9 246 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 GJB4Q9NTQ9 266 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 TRPM5Q9NZQ8 1165 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 EIF2B4Q9UI10 523 aaKnown RBP11.27□□□□□ -0.61
SSBP1-209ENST00000473783 KCNG1Q9UIX4 513 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 PCDHB6Q9Y5E3 794 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 CPQQ9Y646 472 aa11.27□□□□□ -0.61
SSBP1-209ENST00000473783 ARID1BQ8NFD5 2236 aaPredicted RBP11.27□□□□□ -0.61
SSBP1-209ENST00000473783 ABCA12Q86UK0 2595 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 GFRA2O00451 464 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 ENC1O14682 589 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 CDKL5O76039 1030 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 GP1BBP13224 206 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 PSMA5P28066 241 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 CSNK1EP49674 416 aaKnown RBP11.26□□□□□ -0.61
SSBP1-209ENST00000473783 CLDN6P56747 220 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 PCBP4P57723 403 aaKnown RBP11.26□□□□□ -0.61
SSBP1-209ENST00000473783 TEAD4Q15561 434 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 USP49Q70CQ1 688 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 CACTIN-AS1Q8N1I8 211 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 SPIRE2Q8WWL2 714 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 FUBP3Q96I24 572 aaKnown RBP eCLIP11.26□□□□□ -0.61
SSBP1-209ENST00000473783 CEP295NLQ96MC4 621 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 ACOX2Q99424 681 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 ACBD6Q9BR61 282 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 PCED1AQ9H1Q7 454 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 TMEM60Q9H2L4 133 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 CPNE5Q9HCH3 593 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 ITM2CQ9NQX7 267 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 SMPD4Q9NXE4 827 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 CFAP97Q9P2B7 532 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 ANKMY1Q9P2S6 941 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 DERAQ9Y315 318 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 HEMK1Q9Y5R4 338 aaPredicted RBP11.26□□□□□ -0.61
SSBP1-209ENST00000473783 SNX14Q9Y5W7 946 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 SNX11Q9Y5W9 270 aa11.26□□□□□ -0.61
SSBP1-209ENST00000473783 CKAP5Q14008 2032 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 WNT7AO00755 349 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 TERTO14746 1132 aaKnown RBP11.25□□□□□ -0.61
SSBP1-209ENST00000473783 SCAMP3O14828 347 aaKnown RBP11.25□□□□□ -0.61
SSBP1-209ENST00000473783 OGTO15294 1046 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 FAM189A1O60320 539 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 DFNA5O60443 496 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 OXTRP30559 389 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 GRIA4P48058 902 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 PPP3CCP48454 512 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 MAPK7Q13164 816 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 TOB2Q14106 344 aaPredicted RBP11.25□□□□□ -0.61
SSBP1-209ENST00000473783 PDIA5Q14554 519 aa11.25□□□□□ -0.61
SSBP1-209ENST00000473783 TMEM132DQ14C87 1099 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms