RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CCDC142Q17RM4 750 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 FAM171BQ6P995 826 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 VSTM1Q6UX27 236 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 C4orf50Q6ZRC1 276 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 DPH6Q7L8W6 267 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 RASSF3Q86WH2 238 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 SPATA2LQ8IUW3 424 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-206ENST00000471037 SLC9A9Q8IVB4 645 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 FAM114A1Q8IWE2 563 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 ZC3H3Q8IXZ2 948 aaKnown RBP9.66□□□□□ -0.86
SF3A1-206ENST00000471037 ADGRF2Q8IZF7 708 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 CSGALNACT2Q8N6G5 542 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 KIAA1958Q8N8K9 716 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 ARL14EPQ8N8R7 260 aaPredicted RBP9.66□□□□□ -0.86
SF3A1-206ENST00000471037 TSTD1Q8NFU3 115 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 SH3RF2Q8TEC5 729 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 USP33Q8TEY7 942 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 SAAL1Q96ER3 474 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 SPATA17Q96L03 361 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 CNOT6LQ96LI5 555 aaKnown RBP9.66□□□□□ -0.86
SF3A1-206ENST00000471037 CEP63Q96MT8 703 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 DUSP9Q99956 384 aaKnown RBP9.66□□□□□ -0.86
SF3A1-206ENST00000471037 AGPAT3Q9NRZ7 376 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 SIX4Q9UIU6 781 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 SNX9Q9Y5X1 595 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 MYO16Q9Y6X6 1858 aa9.66□□□□□ -0.86
SF3A1-206ENST00000471037 ZNF638Q14966 1978 aaKnown RBP9.65□□□□□ -0.86
SF3A1-206ENST00000471037 KIAA0391O15091 583 aaKnown RBP9.65□□□□□ -0.86
SF3A1-206ENST00000471037 CETN3O15182 167 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 HCRTO43612 131 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 GNA14O95837 355 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 NR3C1P04150 777 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 PROS1P07225 676 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 TMEM191BP0C7N4 346 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 ZNF18P17022 549 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 NR2F2P24468 414 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 OPRD1P41143 372 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 NOVA1P51513 510 aaKnown RBP9.65□□□□□ -0.86
SF3A1-206ENST00000471037 DGKEP52429 567 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 RBP5P82980 135 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 SOWAHAQ2M3V2 549 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 USP39Q53GS9 565 aaKnown RBP9.65□□□□□ -0.86
SF3A1-206ENST00000471037 DAB2IPQ5VWQ8 1189 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 SCARA3Q6AZY7 606 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 PSAPL1Q6NUJ1 521 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 SCN4BQ8IWT1 228 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 ANKRD20A12PQ8NF67 263 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 KBTBD7Q8WVZ9 684 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 SYT15Q9BQS2 421 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 CBWD1Q9BRT8 395 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 TTLL2Q9BWV7 592 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 SRRTQ9BXP5 876 aaKnown RBP9.65□□□□□ -0.86
SF3A1-206ENST00000471037 MTMR12Q9C0I1 747 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 LINC00597Q9H2U6 94 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 GRPEL1Q9HAV7 217 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 PDE11AQ9HCR9 933 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 FANCLQ9NW38 375 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 MAGEC2Q9UBF1 373 aaPredicted RBP9.65□□□□□ -0.86
SF3A1-206ENST00000471037 MMP17Q9ULZ9 603 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 SDK1Q7Z5N4 2213 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 CFAP47Q6ZTR5 3102 aa9.65□□□□□ -0.86
SF3A1-206ENST00000471037 HELZP42694 1942 aaKnown RBP9.64□□□□□ -0.87
SF3A1-206ENST00000471037 ANAPC1Q9H1A4 1944 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 CHD6Q8TD26 2715 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 CEP295Q9C0D2 2601 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 C4orf47A7E2U8 309 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 K7EQS6 105 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 CLIC2O15247 247 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 OLFM2O95897 454 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 KRT19P08727 400 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 HDCP19113 662 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 CSRP1P21291 193 aaKnown RBP9.64□□□□□ -0.87
SF3A1-206ENST00000471037 EEF1GP26641 437 aaKnown RBP9.64□□□□□ -0.87
SF3A1-206ENST00000471037 GBP1P32455 592 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 EIF2DP41214 584 aaKnown RBP9.64□□□□□ -0.87
SF3A1-206ENST00000471037 SLC7A9P82251 487 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 ZXDBP98169 803 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 MYO1EQ12965 1108 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 ADAM9Q13443 819 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 MAPRE1Q15691 268 aaKnown RBP9.64□□□□□ -0.87
SF3A1-206ENST00000471037 CRY1Q16526 586 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 GAB4Q2WGN9 574 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 CDKAL1Q5VV42 579 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 DENND5BQ6ZUT9 1274 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 FILIP1Q7Z7B0 1213 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 GPD1LQ8N335 351 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 XXYLT1Q8NBI6 393 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 OLIG1Q8TAK6 271 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 MYLPFQ96A32 169 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 ANKRD36BP1Q96IX9 119 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 FAM84AQ96KN4 292 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 TPSD1Q9BZJ3 242 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 HSD3B7Q9H2F3 369 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 TMEM9BQ9NQ34 198 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 CRTAC1Q9NQ79 661 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 SAMSN1Q9NSI8 373 aaKnown RBP9.64□□□□□ -0.87
SF3A1-206ENST00000471037 INTS13Q9NVM9 706 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 DMAC2Q9NW81 257 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 EHD2Q9NZN4 543 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 CDH9Q9ULB4 789 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms