RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 USP17L7P0C7H9 530 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 ATF2P15336 505 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 TCP1P17987 556 aaKnown RBP10.24□□□□□ -0.77
CCM2-204ENST00000470837 COMTP21964 271 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 MAN1A1P33908 653 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 BMP8BP34820 402 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 RFC1P35251 1148 aaPredicted RBP10.24□□□□□ -0.77
CCM2-204ENST00000470837 CETN2P41208 172 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 RPL34P49207 117 aaKnown RBP10.24□□□□□ -0.77
CCM2-204ENST00000470837 DNA2P51530 1060 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 EPHB3P54753 998 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 ERVK-21P61565 698 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 YWHAZP63104 245 aaKnown RBP10.24□□□□□ -0.77
CCM2-204ENST00000470837 GPM6BQ13491 265 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 ACAP1Q15027 740 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 DDR2Q16832 855 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 PLPP4Q5VZY2 271 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 LLGL2Q6P1M3 1020 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 RSPO2Q6UXX9 243 aaPredicted RBP10.24□□□□□ -0.77
CCM2-204ENST00000470837 CCDC149Q6ZUS6 474 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 DENND5BQ6ZUT9 1274 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 TDHQ8IZJ6 230 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 ELMOD1Q8N336 334 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 FNIP1Q8TF40 1166 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 AUTS2Q8WXX7 1259 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 PPP2R3CQ969Q6 453 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 SPATA17Q96L03 361 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 CNPY3Q9BT09 278 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 POPDC2Q9HBU9 364 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 RXFP1Q9HBX9 757 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 COMMD8Q9NX08 183 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.24□□□□□ -0.77
CCM2-204ENST00000470837 TJP2Q9UDY2 1190 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 HYOU1Q9Y4L1 999 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 SAR1BQ9Y6B6 198 aa10.24□□□□□ -0.77
CCM2-204ENST00000470837 FNDC1Q4ZHG4 1894 aaPredicted RBP10.23□□□□□ -0.77
CCM2-204ENST00000470837 ALPK3Q96L96 1907 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 COL4A6Q14031 1691 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 CCDC66A2RUB6 948 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 ADAM12O43184 909 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 ABLIM3O94929 683 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 GJB6O95452 261 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 GLUD1P00367 558 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 LRG1P02750 347 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 LTFP02788 710 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 CNPP09543 421 aaKnown RBP10.23□□□□□ -0.77
CCM2-204ENST00000470837 LINC00271P0C7V0 271 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 CSH1P0DML2 217 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 CSH2P0DML3 217 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 YWHAQP27348 245 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 ZNF143P52747 638 aaPredicted RBP10.23□□□□□ -0.77
CCM2-204ENST00000470837 CACNA2D1P54289 1103 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 DAOAP59103 153 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 RPL7AP62424 266 aaKnown RBP10.23□□□□□ -0.77
CCM2-204ENST00000470837 PTPROQ16827 1216 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 DCAF6Q58WW2 860 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 RAB41Q5JT25 222 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 PPP1R15BQ5SWA1 713 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 MEI1Q5TIA1 1274 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 CCDC181Q5TID7 509 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 BTBD8Q5XKL5 378 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 FAM109BQ6ICB4 259 aaPredicted RBP10.23□□□□□ -0.77
CCM2-204ENST00000470837 SND1Q7KZF4 910 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCM2-204ENST00000470837 RSRC2Q7L4I2 434 aaKnown RBP10.23□□□□□ -0.77
CCM2-204ENST00000470837 ARCQ7LC44 396 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 SLFN11Q7Z7L1 901 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 ITIH5Q86UX2 942 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 RHOT1Q8IXI2 618 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 SCML4Q8N228 414 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 MRPL43Q8N983 215 aaKnown RBP10.23□□□□□ -0.77
CCM2-204ENST00000470837 LRRC57Q8N9N7 239 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 ZMIZ2Q8NF64 920 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 SPPL3Q8TCT6 385 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 RNF139Q8WU17 664 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 RXFP2Q8WXD0 754 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 ARNTL2Q8WYA1 636 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 FBXO32Q969P5 355 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 BTBD6Q96KE9 485 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 SLITRK1Q96PX8 696 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 PBX4Q9BYU1 374 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 NKX2-4Q9H2Z4 354 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 TMEM51Q9NW97 253 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 RRN3Q9NYV6 651 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 MAGED2Q9UNF1 606 aaPredicted RBP10.23□□□□□ -0.77
CCM2-204ENST00000470837 IRAK3Q9Y616 596 aa10.23□□□□□ -0.77
CCM2-204ENST00000470837 TCRBV5S1A1TA0A578 114 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 HHLA1C9JL84 531 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 H3BNC9 293 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 KCNK3O14649 394 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 PRPSAP2O60256 369 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 DAB1O75553 588 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 ATP1A1P05023 1023 aaKnown RBP10.22□□□□□ -0.77
CCM2-204ENST00000470837 KRT7P08729 469 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 RALAP11233 206 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 NCAM1P13591 858 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 GBP1P32455 592 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 NOS2P35228 1153 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 MATKP42679 507 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 PAFAH1B1P43034 410 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 PSEN1P49768 467 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms