RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 NME8Q8N427 588 aa17.22■□□□□ 0.35
HOXB3-205ENST00000470495 TNIP2Q8NFZ5 429 aa17.22■□□□□ 0.35
HOXB3-205ENST00000470495 RAB3IPQ96QF0 476 aaPredicted RBP17.22■□□□□ 0.35
HOXB3-205ENST00000470495 OSMRQ99650 979 aa17.22■□□□□ 0.35
HOXB3-205ENST00000470495 NUF2Q9BZD4 464 aa17.22■□□□□ 0.35
HOXB3-205ENST00000470495 DPP3Q9NY33 737 aa17.22■□□□□ 0.35
HOXB3-205ENST00000470495 F5H423 210 aaPredicted RBP17.22■□□□□ 0.35
HOXB3-205ENST00000470495 TAF1CQ15572 869 aaPredicted RBP17.22■□□□□ 0.35
HOXB3-205ENST00000470495 USP50Q70EL3 339 aaPredicted RBP17.22■□□□□ 0.35
HOXB3-205ENST00000470495 CFAP57Q96MR6 1250 aa17.22■□□□□ 0.35
HOXB3-205ENST00000470495 PARK7Q99497 189 aaKnown RBP17.22■□□□□ 0.35
HOXB3-205ENST00000470495 AVENQ9NQS1 362 aaPredicted RBP17.22■□□□□ 0.35
HOXB3-205ENST00000470495 MAD1L1Q9Y6D9 718 aa17.22■□□□□ 0.35
HOXB3-205ENST00000470495 A0A0G2JLL6 359 aaPredicted RBP17.21■□□□□ 0.35
HOXB3-205ENST00000470495 ZCCHC18P0CG32 403 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 GSTT1P30711 240 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 GTF2A2P52657 109 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 C1QBPQ07021 282 aaKnown RBP17.21■□□□□ 0.35
HOXB3-205ENST00000470495 PRRT2Q7Z6L0 340 aaPredicted RBP17.21■□□□□ 0.35
HOXB3-205ENST00000470495 IQCKQ8N0W5 287 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 SUN5Q8TC36 379 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 PYROXD1Q8WU10 500 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 CATSPER2Q96P56 530 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 SYT17Q9BSW7 474 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 PSTPIP1O43586 416 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 VNN1O95497 513 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 PDIA2Q13087 525 aaKnown RBP17.21■□□□□ 0.35
HOXB3-205ENST00000470495 PRAMEF19Q5SWL8 479 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 CENPUQ71F23 418 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 GALNT15Q8N3T1 639 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 FBXL18Q96ME1 805 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 TSNARE1Q96NA8 513 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 ELAC2Q9BQ52 826 aaKnown RBP17.21■□□□□ 0.35
HOXB3-205ENST00000470495 CCDC68Q9H2F9 335 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 SMYD3Q9H7B4 428 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 DDX56Q9NY93 547 aaKnown RBP17.21■□□□□ 0.35
HOXB3-205ENST00000470495 GGT7Q9UJ14 662 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 XPOTO43592 962 aaKnown RBP17.21■□□□□ 0.35
HOXB3-205ENST00000470495 LCP1P13796 627 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 CHN1P15882 459 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 S100A1P23297 94 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 SDC4P31431 198 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 HUNKP57058 714 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 TAS2R40P59535 323 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 MFSD7Q6UXD7 560 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 NT5C1AQ9BXI3 368 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 EPN3Q9H201 632 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 SPC25Q9HBM1 224 aa17.21■□□□□ 0.35
HOXB3-205ENST00000470495 PTPRJQ12913 1337 aa17.21■□□□□ 0.34
HOXB3-205ENST00000470495 CASQ2O14958 399 aaPredicted RBP17.2■□□□□ 0.34
HOXB3-205ENST00000470495 ASS1P00966 412 aaKnown RBP17.2■□□□□ 0.34
HOXB3-205ENST00000470495 SHBGP04278 402 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 FUT4P22083 530 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 TAP1Q03518 808 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 DENND1BQ6P3S1 775 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 KDM7AQ6ZMT4 941 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 ACOT1Q86TX2 421 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 ZBTB8BQ8NAP8 495 aaPredicted RBP17.2■□□□□ 0.34
HOXB3-205ENST00000470495 PHEXP78562 749 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 PTPN11Q06124 597 aaPredicted RBP17.2■□□□□ 0.34
HOXB3-205ENST00000470495 GRIK4Q16099 956 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 KIAA0319LQ8IZA0 1049 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 DDHD1Q8NEL9 900 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 RASA4BC9J798 803 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 RASA4O43374 803 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 ATP6V1G2O95670 118 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 BRAFP15056 766 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 PLPPR4Q7Z2D5 763 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 SDR16C5Q8N3Y7 309 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 PPP1R14CQ8TAE6 165 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 P3H4Q92791 437 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 CDC42EP4Q9H3Q1 356 aaKnown RBP17.2■□□□□ 0.34
HOXB3-205ENST00000470495 GBA2Q9HCG7 927 aaPredicted RBP17.2■□□□□ 0.34
HOXB3-205ENST00000470495 TTLL3Q9Y4R7 772 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 HES2Q9Y543 173 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 CTSHP09668 335 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 HOXD11P31277 338 aaPredicted RBP17.2■□□□□ 0.34
HOXB3-205ENST00000470495 CAV1Q03135 178 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 DUPD1Q68J44 220 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 PCYT2Q99447 389 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 TMEM121Q9BTD3 319 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 DCLK3Q9C098 648 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 C10orf88Q9H8K7 445 aa17.2■□□□□ 0.34
HOXB3-205ENST00000470495 MGEA5O60502 916 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 STIP1P31948 543 aaKnown RBP17.19■□□□□ 0.34
HOXB3-205ENST00000470495 WNT7BP56706 349 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 TMEM53Q6P2H8 277 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 TTC27Q6P3X3 843 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 ZNF554Q86TJ5 538 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 PWWP2AQ96N64 755 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 SNTG2Q9NY99 539 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 NEU2Q9Y3R4 380 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 FSBPO95073 299 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 ZBED1O96006 694 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 RARBP10826 455 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 EIF3EP60228 445 aaKnown RBP17.19■□□□□ 0.34
HOXB3-205ENST00000470495 CENPCQ03188 943 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 NUGGCQ68CJ6 796 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 PLEKHH3Q7Z736 793 aa17.19■□□□□ 0.34
HOXB3-205ENST00000470495 PDIK1LQ8N165 341 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms