RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-209	ENST00000470083	SPATA2L	Q8IUW3	424 aa	Predicted RBP	12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	SPATA17	Q96L03	361 aa		12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	MRGPRX1	Q96LB2	322 aa		12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	CEP295NL	Q96MC4	621 aa		12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	RAB34	Q9BZG1	259 aa		12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	RNF38	Q9H0F5	515 aa		12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	DDX43	Q9NXZ2	648 aa	Known RBP	12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	LARS	Q9P2J5	1176 aa	Known RBP	12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	TBC1D14	Q9P2M4	693 aa		12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	DEC1	Q9P2X7	70 aa		12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	L1RE1	Q9UN81	338 aa		12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	BTBD3	Q9Y2F9	522 aa		12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	COL6A6	A6NMZ7	2263 aa		12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	HELZ	P42694	1942 aa	Known RBP	12.84	□□□□□ -0.35
LSM2-209	ENST00000470083	ZNF840P	A6NDX5	716 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	BCAT2	O15382	392 aa	Predicted RBP	12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	OAS1	P00973	400 aa	Known RBP	12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	SCP2	P22307	547 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	PPP3CC	P48454	512 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	MYL7	Q01449	175 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	SUZ12	Q15022	739 aa	Known RBP	12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	CCDC142	Q17RM4	750 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	KRT79	Q5XKE5	535 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	BTBD8	Q5XKL5	378 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	EGFLAM	Q63HQ2	1017 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	SDE2	Q6IQ49	451 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	DHRS13	Q6UX07	377 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	CHPF	Q8IZ52	775 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	TMEM86A	Q8N2M4	240 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	C4orf32	Q8N8J7	132 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	CADM4	Q8NFZ8	388 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	OTUB2	Q96DC9	234 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	GABRG3	Q99928	467 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	TTLL2	Q9BWV7	592 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	MIR1-1HG	Q9H1L0	117 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	SCN1A	P35498	2009 aa		12.83	□□□□□ -0.36
LSM2-209	ENST00000470083	E2F8	A0AVK6	867 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	ERVH48-1	M5A8F1	160 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	HUS1	O60921	280 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	NCAM1	P13591	858 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	PCSK1	P29120	753 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	GRK6	P43250	576 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	ACOT2	P49753	483 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	USP46	P62068	366 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	SEMG2	Q02383	582 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	KCNC4	Q03721	635 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	TTC38	Q5R3I4	469 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	C6orf118	Q5T5N4	469 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	SLC39A4	Q6P5W5	647 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	VSTM1	Q6UX27	236 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	DENND5B	Q6ZUT9	1274 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	NAT16	Q8N8M0	369 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	NSUN7	Q8NE18	718 aa	Known RBP	12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	ENGASE	Q8NFI3	743 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	SNIP1	Q8TAD8	396 aa	Known RBP	12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	BAP1	Q92560	729 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	TOE1	Q96GM8	510 aa	Known RBP	12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	ACOX2	Q99424	681 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	SLC6A17	Q9H1V8	727 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	WSB2	Q9NYS7	404 aa	Predicted RBP	12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	EHD2	Q9NZN4	543 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	KCND2	Q9NZV8	630 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	MYO18A	Q92614	2054 aa	Known RBP	12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	PTPN13	Q12923	2485 aa		12.82	□□□□□ -0.36
LSM2-209	ENST00000470083	KNL1	Q8NG31	2342 aa		12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	PP2D1	A8MPX8	630 aa		12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	POU5F1	Q01860	360 aa	Known RBP	12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	MYO1E	Q12965	1108 aa		12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	CCDC157	Q569K6	752 aa		12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	FAM171B	Q6P995	826 aa		12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	KIAA1324	Q6UXG2	1013 aa	Known RBP	12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	C4orf50	Q6ZRC1	276 aa		12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	METTL3	Q86U44	580 aa	Known RBP	12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	NECAB1	Q8N987	351 aa		12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	SYT2	Q8N9I0	419 aa	Predicted RBP	12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	ERLEC1	Q96DZ1	483 aa		12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	GPR174	Q9BXC1	333 aa		12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	USP36	Q9P275	1121 aa	Known RBP	12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	PCDHB6	Q9Y5E3	794 aa		12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	COL12A1	Q99715	3063 aa		12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	CABIN1	Q9Y6J0	2220 aa		12.81	□□□□□ -0.36
LSM2-209	ENST00000470083	GABRD	O14764	452 aa		12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	TRIM24	O15164	1050 aa		12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	JAK2	O60674	1132 aa		12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	MBL2	P11226	248 aa	Predicted RBP	12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	HNF1B	P35680	557 aa		12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	TRAPPC10	P48553	1259 aa		12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	LHX1	P48742	406 aa		12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	TAF1B	Q53T94	588 aa	Predicted RBP	12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	DCAF12L1	Q5VU92	463 aa		12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	GRAMD4	Q6IC98	578 aa		12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	OSTM1	Q86WC4	334 aa		12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	NT5DC4	Q86YG4	428 aa		12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	C1orf216	Q8TAB5	229 aa		12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	GTF3C6	Q969F1	213 aa		12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	WBP1	Q96G27	269 aa		12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	HNRNPAB	Q99729	332 aa	Known RBP	12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	DUSP9	Q99956	384 aa	Known RBP	12.8	□□□□□ -0.36
LSM2-209	ENST00000470083	MMTAG2	Q9BU76	263 aa	Known RBP	12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms