RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 WDR5BQ86VZ2 330 aa11.27□□□□□ -0.61
TGFBR3-205ENST00000468996 UNC93AQ86WB7 457 aa11.27□□□□□ -0.61
TGFBR3-205ENST00000468996 CYFIP2Q96F07 1278 aa11.27□□□□□ -0.61
TGFBR3-205ENST00000468996 SMOQ99835 787 aa11.27□□□□□ -0.61
TGFBR3-205ENST00000468996 CCSER2Q9H7U1 834 aa11.27□□□□□ -0.61
TGFBR3-205ENST00000468996 GMIPQ9P107 970 aa11.27□□□□□ -0.61
TGFBR3-205ENST00000468996 TNFRSF10BO14763 440 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 AXIN1O15169 862 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 CETN3O15182 167 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 RPP40O75818 363 aaKnown RBP11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 RETP07949 1114 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 CCDC192P0DO97 292 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 IRF1P10914 325 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 TCF3P15923 654 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 HOXA6P31267 233 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 PRCPP42785 496 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 SLC6A11P48066 632 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 NUCB2P80303 420 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 FOXK2Q01167 660 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 DHCR24Q15392 516 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 NFIL3Q16649 462 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 ZNF394Q53GI3 561 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 ERMP1Q7Z2K6 904 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 DDX42Q86XP3 938 aaKnown RBP eCLIP11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 CCDC33Q8N5R6 958 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 CAMKK1Q8N5S9 505 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 FAM160A2Q8N612 972 aaPredicted RBP11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 OVCA2Q8WZ82 227 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 EZH1Q92800 747 aaPredicted RBP11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 ERCC4Q92889 916 aaPredicted RBP11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 HEXIM2Q96MH2 286 aaKnown RBP11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 HHIPQ96QV1 700 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 TWNKQ96RR1 684 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 NT5C1AQ9BXI3 368 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 DNAI2Q9GZS0 605 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 CYP3A43Q9HB55 503 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 APOBEC3GQ9HC16 384 aaKnown RBP11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 PARD6AQ9NPB6 346 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 RMND1Q9NWS8 449 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 COMMD8Q9NX08 183 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 SH3BP1Q9Y3L3 701 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 FANCMQ8IYD8 2048 aa11.26□□□□□ -0.61
TGFBR3-205ENST00000468996 KIF26AQ9ULI4 1882 aaPredicted RBP11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 ANTXRLA6NF34 631 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 SMC2O95347 1197 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 OLFM2O95897 454 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 TBX18O95935 607 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 CYP17A1P05093 508 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 FAM200BP0CF97 657 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 EPB41P11171 864 aaKnown RBP11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 ACO1P21399 889 aaKnown RBP11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 TGM1P22735 817 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 OPRD1P41143 372 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 PGFP49763 221 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 LMNB2Q03252 620 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 DMC1Q14565 340 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 KRT39Q6A163 491 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 ISM2Q6H9L7 571 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 RHBDF2Q6PJF5 856 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 SYT13Q7L8C5 426 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 TTC30AQ86WT1 665 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 FMR1NBQ8N0W7 255 aaPredicted RBP11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 NAT16Q8N8M0 369 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 ZMIZ2Q8NF64 920 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 CCDC26Q8TAB7 109 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 GAB3Q8WWW8 586 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 SEMA4DQ92854 862 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 HNRNPABQ99729 332 aaKnown RBP11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 TSG101Q99816 390 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 NIF3L1Q9GZT8 377 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 FBXO44Q9H4M3 255 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 TMEM8AQ9HCN3 771 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 CSNK1G1Q9HCP0 422 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 TLR8Q9NR97 1041 aaKnown RBP11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 IL37Q9NZH6 218 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 TBC1D14Q9P2M4 693 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 INVSQ9Y283 1065 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 DENND4CQ5VZ89 1909 aa11.25□□□□□ -0.61
TGFBR3-205ENST00000468996 ATG2BQ96BY7 2078 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 E2F8A0AVK6 867 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 PRR5-ARHGAP8B1AHC4 643 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 K7EQS6 105 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 STX10O60499 249 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 APBB3O95704 486 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 ADH1CP00326 375 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 SDHBP21912 280 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 GTF2H1P32780 548 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 ARHGAP8P85298 464 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 CCDC6Q16204 474 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 ANO4Q32M45 955 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 EDRF1Q3B7T1 1238 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 ZCWPW2Q504Y3 356 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 DCAF17Q5H9S7 520 aaPredicted RBP11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 LY6G5CQ5SRR4 150 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 ZNF658Q5TYW1 1059 aaPredicted RBP11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 EMC10Q5UCC4 262 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 TCERG1LQ5VWI1 586 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 SNX30Q5VWJ9 437 aa11.24□□□□□ -0.61
TGFBR3-205ENST00000468996 ANKRD40Q6AI12 368 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms