RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 CYB561D2O14569 222 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 RASGRF2O14827 1237 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 ALOX15BO15296 676 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 GABBR2O75899 941 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 FBXO21O94952 628 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 CYP11A1P05108 521 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 NPR3P17342 541 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 PTPN1P18031 435 aaKnown RBP7.96□□□□□ -1.14
COL6A3-208ENST00000468792 IL4RP24394 825 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 MAGEA6P43360 314 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 MMP13P45452 471 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 NR2C2P49116 596 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 IRX5P78411 483 aaPredicted RBP7.96□□□□□ -1.14
COL6A3-208ENST00000468792 OTUD4Q01804 1114 aaKnown RBP7.96□□□□□ -1.14
COL6A3-208ENST00000468792 SP3Q02447 781 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 ORC1Q13415 861 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 XRCC4Q13426 336 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 DPYSL3Q14195 570 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 STAT4Q14765 748 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 NOMO1Q15155 1222 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 DPYSL2Q16555 572 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 GLRA4Q5JXX5 417 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 ZFYVE27Q5T4F4 411 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 RNASEH2BQ5TBB1 312 aaKnown RBP7.96□□□□□ -1.14
COL6A3-208ENST00000468792 IZUMO3Q5VZ72 239 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 SLC9A4Q6AI14 798 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 TRNP1Q6NT89 227 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 CXCL17Q6UXB2 119 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 LRRC31Q6UY01 552 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 BEND5Q7L4P6 421 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 GSTA5Q7RTV2 222 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 SPATS2Q86XZ4 545 aaKnown RBP7.96□□□□□ -1.14
COL6A3-208ENST00000468792 TDRPQ86YL5 185 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 EMC1Q8N766 993 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 ACTL9Q8TC94 416 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 PXYLP1Q8TE99 480 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 PGBD4Q96DM1 585 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 UROC1Q96N76 676 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 RNF157Q96PX1 679 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 SLC9A7Q96T83 725 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 CCDC77Q9BR77 488 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 MAK16Q9BXY0 300 aaKnown RBP7.96□□□□□ -1.14
COL6A3-208ENST00000468792 CDC42EP4Q9H3Q1 356 aaKnown RBP7.96□□□□□ -1.14
COL6A3-208ENST00000468792 XPNPEP3Q9NQH7 507 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 RRN3Q9NYV6 651 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 LGALS13Q9UHV8 139 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 GGA2Q9UJY4 613 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 DSEQ9UL01 958 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 GABRQQ9UN88 632 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 ACTL7BQ9Y614 415 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 PTCH2Q9Y6C5 1203 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 GRIN2DO15399 1336 aa7.96□□□□□ -1.14
COL6A3-208ENST00000468792 BCLAF3A2AJT9 711 aaKnown RBP7.95□□□□□ -1.14
COL6A3-208ENST00000468792 ARL5CA6NH57 179 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 C9IYK1 514 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 E7ESA3 106 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 MCF2LO15068 1137 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 RGS16O15492 202 aaPredicted RBP7.95□□□□□ -1.14
COL6A3-208ENST00000468792 PGK1P00558 417 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 ASGR1P07306 291 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 COL6A1P12109 1028 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 LMO2P25791 158 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 PCSK1P29120 753 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 LSP1P33241 339 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 NOS2P35228 1153 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 GJC1P36383 396 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 MATKP42679 507 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 MAGEA4P43358 317 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 ZNF135P52742 658 aaPredicted RBP7.95□□□□□ -1.14
COL6A3-208ENST00000468792 SLC18A1P54219 525 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 HDAC4P56524 1084 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 PRKCZQ05513 592 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 NR1H3Q13133 447 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 KCNA10Q16322 511 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 UPP1Q16831 310 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 TRIM71Q2Q1W2 868 aaKnown RBP7.95□□□□□ -1.14
COL6A3-208ENST00000468792 P3H1Q32P28 736 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 SLC25A52Q3SY17 297 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 ZC3H12AQ5D1E8 599 aaKnown RBP7.95□□□□□ -1.14
COL6A3-208ENST00000468792 ERMARDQ5T6L9 678 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 KAZNQ674X7 775 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 KCTD16Q68DU8 428 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 AGMOQ6ZNB7 445 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 BZW1Q7L1Q6 419 aaKnown RBP7.95□□□□□ -1.14
COL6A3-208ENST00000468792 TAOK1Q7L7X3 1001 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 RNF180Q86T96 592 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 SCUBE3Q8IX30 993 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 PPIL6Q8IXY8 311 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 FUKQ8N0W3 1084 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 TMEM130Q8N3G9 435 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 SH2D3CQ8N5H7 860 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 SLC43A3Q8NBI5 491 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 OR2W6PQ8NHA6 318 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 SLC2A14Q8TDB8 520 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 FAM172AQ8WUF8 416 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 HAUS1Q96CS2 278 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 PGAP3Q96FM1 320 aaPredicted RBP7.95□□□□□ -1.14
COL6A3-208ENST00000468792 SENP8Q96LD8 212 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 CFAP57Q96MR6 1250 aa7.95□□□□□ -1.14
COL6A3-208ENST00000468792 SLC2A13Q96QE2 648 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms