RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 A0A087X0T9 212 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 E5RJQ4 531 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 ZNF197O14709 1029 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 ZBED1O96006 694 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 RHOP08100 348 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 FAM228BP0C875 321 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 LCP1P13796 627 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 KCNA5P22460 613 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 CDC25CP30307 473 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 USP46P62068 366 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 CCDC173Q0VFZ6 552 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 TAF10Q12962 218 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 ASTE1Q2TB18 679 aaPredicted RBP16■□□□□ 0.15
SNIP1-202ENST00000468040 PABPC1LQ4VXU2 614 aaKnown RBP16■□□□□ 0.15
SNIP1-202ENST00000468040 PM20D1Q6GTS8 502 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 PDZD4Q76G19 769 aaPredicted RBP16■□□□□ 0.15
SNIP1-202ENST00000468040 GRASPQ7Z6J2 395 aaPredicted RBP16■□□□□ 0.15
SNIP1-202ENST00000468040 TMC8Q8IU68 726 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 ARHGAP18Q8N392 663 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 SMRP1Q8NCR6 262 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 CCDC112Q8NEF3 446 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 IRGQQ8WZA9 623 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 FBXO32Q969P5 355 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 C18orf8Q96DM3 657 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 LRRC3Q9BY71 257 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 ULBP1Q9BZM6 244 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 AVENQ9NQS1 362 aaPredicted RBP16■□□□□ 0.15
SNIP1-202ENST00000468040 HCFC1R1Q9NWW0 138 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 DNMT3BQ9UBC3 853 aaKnown RBP16■□□□□ 0.15
SNIP1-202ENST00000468040 NAGPAQ9UK23 515 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 STRIP2Q9ULQ0 834 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 GREB1Q4ZG55 1949 aa16■□□□□ 0.15
SNIP1-202ENST00000468040 NRDCO43847 1150 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 RTN2O75298 545 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 CALB1P05937 261 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 PTMAP06454 111 aaKnown RBP15.99■□□□□ 0.15
SNIP1-202ENST00000468040 USP17L7P0C7H9 530 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 MYL4P12829 197 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 CYLC1P35663 651 aaPredicted RBP15.99■□□□□ 0.15
SNIP1-202ENST00000468040 MTHFRP42898 656 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 GABRB2P47870 512 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 GFPT1Q06210 699 aaPredicted RBP15.99■□□□□ 0.15
SNIP1-202ENST00000468040 C1QBPQ07021 282 aaKnown RBP15.99■□□□□ 0.15
SNIP1-202ENST00000468040 ALKBH5Q6P6C2 394 aaKnown RBP15.99■□□□□ 0.15
SNIP1-202ENST00000468040 TOGARAM2Q6ZUX3 1019 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 MON1AQ86VX9 555 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 TRIM11Q96F44 468 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 VCPIP1Q96JH7 1222 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 NECTIN4Q96NY8 510 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 TRIM62Q9BVG3 475 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 ZNF334Q9HCZ1 680 aaPredicted RBP15.99■□□□□ 0.15
SNIP1-202ENST00000468040 WDR6Q9NNW5 1121 aaKnown RBP15.99■□□□□ 0.15
SNIP1-202ENST00000468040 TLR8Q9NR97 1041 aaKnown RBP15.99■□□□□ 0.15
SNIP1-202ENST00000468040 TRPM5Q9NZQ8 1165 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 ADAM22Q9P0K1 906 aa15.99■□□□□ 0.15
SNIP1-202ENST00000468040 TMCO5BA8MYB1 307 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 H3BQ06 376 aaPredicted RBP15.98■□□□□ 0.15
SNIP1-202ENST00000468040 PIK3R2O00459 728 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 PAPSS1O43252 624 aaPredicted RBP15.98■□□□□ 0.15
SNIP1-202ENST00000468040 GABBR2O75899 941 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 IPO7O95373 1038 aaKnown RBP15.98■□□□□ 0.15
SNIP1-202ENST00000468040 FTLP02792 175 aaPredicted RBP15.98■□□□□ 0.15
SNIP1-202ENST00000468040 ERBB2P04626 1255 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 GABRR2P28476 465 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 PSEN1P49768 467 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 DAOAP59103 153 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 MRPS5P82675 430 aaKnown RBP15.98■□□□□ 0.15
SNIP1-202ENST00000468040 SMAD4Q13485 552 aaKnown RBP15.98■□□□□ 0.15
SNIP1-202ENST00000468040 MMS22LQ6ZRQ5 1243 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 MON1BQ7L1V2 547 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 LRRC8AQ8IWT6 810 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 SCUBE3Q8IX30 993 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 HS6ST3Q8IZP7 471 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 GOLGA1Q92805 767 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 C11orf70Q9BRQ4 267 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 ISCUQ9H1K1 167 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 IL21Q9HBE4 155 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 TAS2R14Q9NYV8 317 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 GMIPQ9P107 970 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 WDR35Q9P2L0 1181 aa15.98■□□□□ 0.15
SNIP1-202ENST00000468040 CLUHO75153 1309 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 SOWAHDA6NJG2 315 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 F11P03951 625 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 MYBL1P10243 752 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 FSHRP23945 695 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 SCNN1AP37088 669 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 GSCP56915 257 aaPredicted RBP15.97■□□□□ 0.15
SNIP1-202ENST00000468040 SPA17Q15506 151 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 CLUL1Q15846 466 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 PRSS36Q5K4E3 855 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 CCDC122Q5T0U0 273 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 SNX30Q5VWJ9 437 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 OR6B2Q6IFH4 312 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 TMEM139Q8IV31 216 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 MCOLN2Q8IZK6 566 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 MRPS31Q92665 395 aaKnown RBP15.97■□□□□ 0.15
SNIP1-202ENST00000468040 PPP1R9BQ96SB3 815 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 LUC7LQ9NQ29 371 aaKnown RBP15.97■□□□□ 0.15
SNIP1-202ENST00000468040 SPTLC3Q9NUV7 552 aa15.97■□□□□ 0.15
SNIP1-202ENST00000468040 TJP2Q9UDY2 1190 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms