RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 MYL4P12829 197 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 TNFAIP3P21580 790 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 FSHRP23945 695 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 GABRR2P28476 465 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 RGS7P49802 495 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 NTHL1P78549 312 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 CENPCQ03188 943 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 ADIGQ0VDE8 80 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 TAF10Q12962 218 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 CLEC16AQ2KHT3 1053 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 TDRD12Q587J7 1177 aaKnown RBP16.84■□□□□ 0.29
GPC1-207ENST00000466624 SNX30Q5VWJ9 437 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 PTCRAQ6ISU1 281 aaPredicted RBP16.84■□□□□ 0.29
GPC1-207ENST00000466624 GAREM2Q75VX8 874 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 ZNF571Q7Z3V5 609 aaPredicted RBP16.84■□□□□ 0.29
GPC1-207ENST00000466624 TMEM150AQ86TG1 271 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 VPS36Q86VN1 386 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 SIX6OS1Q8N1H7 587 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 MSANTD4Q8NCY6 345 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 IRGQQ8WZA9 623 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 FBXO32Q969P5 355 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 PPP1R13BQ96KQ4 1090 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 MIS12Q9H081 205 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 POMKQ9H5K3 350 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 PRDM6Q9NQX0 595 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 CDH22Q9UJ99 828 aa16.84■□□□□ 0.29
GPC1-207ENST00000466624 SSU72P8A0A1W2PR75 194 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 SART1O43290 800 aaKnown RBP16.83■□□□□ 0.28
GPC1-207ENST00000466624 MOSPD3O75425 235 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 TADA3O75528 432 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 GABBR2O75899 941 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 ZBED1O96006 694 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 SKILP12757 684 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 PFKLP17858 780 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 DDX6P26196 483 aaKnown RBP eCLIP16.83■□□□□ 0.28
GPC1-207ENST00000466624 CCR2P41597 374 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 GABRB2P47870 512 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 PSEN1P49768 467 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 MAPK8IP2Q13387 824 aaPredicted RBP16.83■□□□□ 0.28
GPC1-207ENST00000466624 SLC5A9Q2M3M2 681 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 PTPN20Q4JDL3 420 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 ZDHHC17Q8IUH5 632 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 ARHGAP18Q8N392 663 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 SLC30A5Q8TAD4 765 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 SHKBP1Q8TBC3 707 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 IPO4Q8TEX9 1081 aaKnown RBP16.83■□□□□ 0.28
GPC1-207ENST00000466624 ATXN2LQ8WWM7 1075 aaKnown RBP16.83■□□□□ 0.28
GPC1-207ENST00000466624 PANX2Q96RD6 677 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 CPXM1Q96SM3 734 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 PCDHB18PQ96TA0 734 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 ULBP1Q9BZM6 244 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 ST7Q9NRC1 585 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.83■□□□□ 0.28
GPC1-207ENST00000466624 TRPM5Q9NZQ8 1165 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 ARHGAP20Q9P2F6 1191 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 USTQ9Y2C2 406 aa16.83■□□□□ 0.28
GPC1-207ENST00000466624 MRPS23Q9Y3D9 190 aaKnown RBP16.83■□□□□ 0.28
GPC1-207ENST00000466624 ZFP37Q9Y6Q3 630 aaPredicted RBP16.83■□□□□ 0.28
GPC1-207ENST00000466624 HELZP42694 1942 aaKnown RBP16.82■□□□□ 0.28
GPC1-207ENST00000466624 A0A1W2PRU2 124 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 E5RJQ4 531 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 GZMAP12544 262 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 LCP1P13796 627 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 NSFP46459 744 aaKnown RBP16.82■□□□□ 0.28
GPC1-207ENST00000466624 TUBP50607 506 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 DAOAP59103 153 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 TFF2Q03403 129 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 GOLGA8FQ08AF8 430 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 GOLGA8DPQ0D2H9 430 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 IFRD2Q12894 506 aaPredicted RBP16.82■□□□□ 0.28
GPC1-207ENST00000466624 ARHGAP15Q53QZ3 475 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 NAA35Q5VZE5 725 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 MON1AQ86VX9 555 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 ERICH1Q86X53 443 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 PHF13Q86YI8 300 aaPredicted RBP16.82■□□□□ 0.28
GPC1-207ENST00000466624 ZNF276Q8N554 614 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 MRPS31Q92665 395 aaKnown RBP16.82■□□□□ 0.28
GPC1-207ENST00000466624 TCEAL4Q96EI5 215 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 PHF7Q9BWX1 381 aaPredicted RBP16.82■□□□□ 0.28
GPC1-207ENST00000466624 ATXN3LQ9H3M9 355 aa16.82■□□□□ 0.28
GPC1-207ENST00000466624 TLR8Q9NR97 1041 aaKnown RBP16.82■□□□□ 0.28
GPC1-207ENST00000466624 SEPT11Q9NVA2 429 aaKnown RBP16.82■□□□□ 0.28
GPC1-207ENST00000466624 ZNF840PA6NDX5 716 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 DDX3XO00571 662 aaKnown RBP eCLIP16.81■□□□□ 0.28
GPC1-207ENST00000466624 USP17L7P0C7H9 530 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 FECHP22830 423 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 MMP8P22894 467 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 WEE1P30291 646 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 SCNN1AP37088 669 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 GSCP56915 257 aaPredicted RBP16.81■□□□□ 0.28
GPC1-207ENST00000466624 GSDMDP57764 484 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 MRPS5P82675 430 aaKnown RBP16.81■□□□□ 0.28
GPC1-207ENST00000466624 BHLHA9Q7RTU4 235 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 ITFG1Q8TB96 612 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 CPA5Q8WXQ8 436 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 CLIC5Q9NZA1 410 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 GDE1Q9NZC3 331 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 GMIPQ9P107 970 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 XIRP2A4UGR9 3374 aa16.81■□□□□ 0.28
GPC1-207ENST00000466624 PRUNE2Q8WUY3 3088 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms