RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 PATJQ8NI35 1801 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 WDFY3Q8IZQ1 3526 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 CCDC194A0A1B0GVG4 234 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 FADS2P1A8MWK0 482 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 HRKO00198 91 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 MEIS2O14770 477 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 MEFVO15553 781 aaPredicted RBP6.51□□□□□ -1.37
NCL-208ENST00000466274 EXTL3O43909 919 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 PTPN2P17706 415 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 RPL17P18621 184 aaKnown RBP6.51□□□□□ -1.37
NCL-208ENST00000466274 YBX1P67809 324 aaKnown RBP6.51□□□□□ -1.37
NCL-208ENST00000466274 IRX4P78413 519 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 SRSF1Q07955 248 aaKnown RBP eCLIP6.51□□□□□ -1.37
NCL-208ENST00000466274 SEMA3BQ13214 749 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 VMACQ2NL98 169 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 MCMDC2Q4G0Z9 681 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 SEZ6Q53EL9 994 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 USP39Q53GS9 565 aaKnown RBP6.51□□□□□ -1.37
NCL-208ENST00000466274 FAM78AQ5JUQ0 283 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 SWSAP1Q6NVH7 229 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 FUT10Q6P4F1 479 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 GK5Q6ZS86 529 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 CATSPER4Q7RTX7 472 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 MFSD6LQ8IWD5 586 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 ADAMTS14Q8WXS8 1223 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 SMARCD2Q92925 531 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 EXOC4Q96A65 974 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 MXRA8Q9BRK3 442 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 TTPALQ9BTX7 342 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 LY9Q9HBG7 655 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 SEC63Q9UGP8 760 aaKnown RBP6.51□□□□□ -1.37
NCL-208ENST00000466274 ADAMTS1Q9UHI8 967 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 ADAM28Q9UKQ2 775 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 APOBEC2Q9Y235 224 aaKnown RBP6.51□□□□□ -1.37
NCL-208ENST00000466274 FREM2Q5SZK8 3169 aa6.51□□□□□ -1.37
NCL-208ENST00000466274 TTC41PQ6P2S7 1318 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 ADAMTS20P59510 1910 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 MYBPHLA2RUH7 354 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 MEIS3P2A8K0S8 358 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 SPECC1L-ADORA2AF8WAN1 911 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 N4BP3O15049 544 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 CHADO15335 359 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 SMARCA5O60264 1052 aaPredicted RBP6.5□□□□□ -1.37
NCL-208ENST00000466274 B4GALT3O60512 393 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 OPHN1O60890 802 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 LRG1P02750 347 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 ITGA4P13612 1032 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 FCARP24071 287 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 MCM4P33991 863 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 AFF3P51826 1226 aaKnown RBP6.5□□□□□ -1.37
NCL-208ENST00000466274 CDR1P51861 262 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 MFAP1P55081 439 aaKnown RBP6.5□□□□□ -1.37
NCL-208ENST00000466274 ERVFRD-1P60508 538 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 GRSF1Q12849 480 aaKnown RBP eCLIP6.5□□□□□ -1.37
NCL-208ENST00000466274 TRIP6Q15654 476 aaKnown RBP6.5□□□□□ -1.37
NCL-208ENST00000466274 MAPK6Q16659 721 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 HSF5Q4G112 596 aaPredicted RBP6.5□□□□□ -1.37
NCL-208ENST00000466274 TRIM61Q5EBN2 209 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 CYP4A22Q5TCH4 519 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 VITQ6UXI7 678 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 PDZD4Q76G19 769 aaPredicted RBP6.5□□□□□ -1.37
NCL-208ENST00000466274 NLRC3Q7RTR2 1065 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 TRMT1LQ7Z2T5 733 aaKnown RBP6.5□□□□□ -1.37
NCL-208ENST00000466274 MRPL10Q7Z7H8 261 aaKnown RBP6.5□□□□□ -1.37
NCL-208ENST00000466274 ZNF410Q86VK4 478 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 HACE1Q8IYU2 909 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 ELMOD1Q8N336 334 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 LRRC71Q8N4P6 559 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 PIGKQ92643 395 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 RRP36Q96EU6 259 aaKnown RBP6.5□□□□□ -1.37
NCL-208ENST00000466274 ZNF668Q96K58 619 aaPredicted RBP6.5□□□□□ -1.37
NCL-208ENST00000466274 KRT23Q9C075 422 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 GPR88Q9GZN0 384 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 AGO4Q9HCK5 861 aaKnown RBP6.5□□□□□ -1.37
NCL-208ENST00000466274 HCFC1R1Q9NWW0 138 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 GFOD1Q9NXC2 390 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 TNFRSF10DQ9UBN6 386 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 GPR55Q9Y2T6 319 aaPredicted RBP6.5□□□□□ -1.37
NCL-208ENST00000466274 MIA3Q5JRA6 1907 aa6.5□□□□□ -1.37
NCL-208ENST00000466274 LOXHD1Q8IVV2 1947 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 AKAP13Q12802 2813 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 SLC38A8A6NNN8 435 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 RRP8O43159 456 aaKnown RBP6.49□□□□□ -1.37
NCL-208ENST00000466274 CSDE1O75534 798 aaKnown RBP6.49□□□□□ -1.37
NCL-208ENST00000466274 APBB3O95704 486 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 CEBPBP17676 345 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 ENGP17813 658 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 ELF1P32519 619 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 CTSKP43235 329 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 AMPD2Q01433 879 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 DSC1Q08554 894 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 SPIRE1Q08AE8 756 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 NCBP1Q09161 790 aaKnown RBP6.49□□□□□ -1.37
NCL-208ENST00000466274 ELAVL2Q12926 359 aaKnown RBP6.49□□□□□ -1.37
NCL-208ENST00000466274 ITGB3BPQ13352 177 aaPredicted RBP6.49□□□□□ -1.37
NCL-208ENST00000466274 RAB33AQ14088 237 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 GRM4Q14833 912 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 PON2Q15165 354 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 PSMD5Q16401 504 aa6.49□□□□□ -1.37
NCL-208ENST00000466274 CEP55Q53EZ4 464 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms