RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 TLE3Q04726 772 aa10.15□□□□□ -0.78
APP-213ENST00000464867 CCDC173Q0VFZ6 552 aa10.15□□□□□ -0.78
APP-213ENST00000464867 USP4Q13107 963 aa10.15□□□□□ -0.78
APP-213ENST00000464867 DMP1Q13316 513 aaPredicted RBP10.15□□□□□ -0.78
APP-213ENST00000464867 LY6DQ14210 128 aa10.15□□□□□ -0.78
APP-213ENST00000464867 ZNF568Q3ZCX4 644 aa10.15□□□□□ -0.78
APP-213ENST00000464867 DHRS13Q6UX07 377 aa10.15□□□□□ -0.78
APP-213ENST00000464867 PIGOQ8TEQ8 1089 aa10.15□□□□□ -0.78
APP-213ENST00000464867 C2orf15Q8WU43 125 aaKnown RBP10.15□□□□□ -0.78
APP-213ENST00000464867 TMEM176AQ96HP8 235 aa10.15□□□□□ -0.78
APP-213ENST00000464867 IFT74Q96LB3 600 aa10.15□□□□□ -0.78
APP-213ENST00000464867 TMEM206Q9H813 350 aa10.15□□□□□ -0.78
APP-213ENST00000464867 CALCOCO1Q9P1Z2 691 aa10.15□□□□□ -0.78
APP-213ENST00000464867 CNTN3Q9P232 1028 aa10.15□□□□□ -0.78
APP-213ENST00000464867 UXTQ9UBK9 157 aaPredicted RBP10.15□□□□□ -0.78
APP-213ENST00000464867 MAGED2Q9UNF1 606 aaPredicted RBP10.15□□□□□ -0.78
APP-213ENST00000464867 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.15□□□□□ -0.78
APP-213ENST00000464867 TNFSF13BQ9Y275 285 aa10.15□□□□□ -0.78
APP-213ENST00000464867 CREBBPQ92793 2442 aa10.15□□□□□ -0.79
APP-213ENST00000464867 OBSL1O75147 1896 aa10.15□□□□□ -0.79
APP-213ENST00000464867 NID2Q14112 1375 aa10.14□□□□□ -0.79
APP-213ENST00000464867 ENO4A6NNW6 628 aa10.14□□□□□ -0.79
APP-213ENST00000464867 MEI4A8MW99 385 aa10.14□□□□□ -0.79
APP-213ENST00000464867 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.14□□□□□ -0.79
APP-213ENST00000464867 CELA2BP08218 269 aaPredicted RBP10.14□□□□□ -0.79
APP-213ENST00000464867 CDK4P11802 303 aa10.14□□□□□ -0.79
APP-213ENST00000464867 TYMPP19971 482 aa10.14□□□□□ -0.79
APP-213ENST00000464867 MAOBP27338 520 aa10.14□□□□□ -0.79
APP-213ENST00000464867 ADSSP30520 456 aa10.14□□□□□ -0.79
APP-213ENST00000464867 TMPRSS3P57727 454 aa10.14□□□□□ -0.79
APP-213ENST00000464867 EXOSC10Q01780 885 aaKnown RBP10.14□□□□□ -0.79
APP-213ENST00000464867 SMARCB1Q12824 385 aa10.14□□□□□ -0.79
APP-213ENST00000464867 ZNF77Q15935 545 aa10.14□□□□□ -0.79
APP-213ENST00000464867 HLA-BQ31612 363 aa10.14□□□□□ -0.79
APP-213ENST00000464867 INAVAQ3KP66 663 aa10.14□□□□□ -0.79
APP-213ENST00000464867 SLC39A12Q504Y0 691 aa10.14□□□□□ -0.79
APP-213ENST00000464867 NT5DC1Q5TFE4 455 aa10.14□□□□□ -0.79
APP-213ENST00000464867 SDE2Q6IQ49 451 aa10.14□□□□□ -0.79
APP-213ENST00000464867 GALNT17Q6IS24 598 aa10.14□□□□□ -0.79
APP-213ENST00000464867 FOXR1Q6PIV2 292 aa10.14□□□□□ -0.79
APP-213ENST00000464867 NEK8Q86SG6 692 aa10.14□□□□□ -0.79
APP-213ENST00000464867 TMEM150AQ86TG1 271 aa10.14□□□□□ -0.79
APP-213ENST00000464867 CEP120Q8N960 986 aa10.14□□□□□ -0.79
APP-213ENST00000464867 RIN3Q8TB24 985 aa10.14□□□□□ -0.79
APP-213ENST00000464867 MED8Q96G25 268 aa10.14□□□□□ -0.79
APP-213ENST00000464867 YTHDC1Q96MU7 727 aaKnown RBP10.14□□□□□ -0.79
APP-213ENST00000464867 LGMNQ99538 433 aa10.14□□□□□ -0.79
APP-213ENST00000464867 HSD17B14Q9BPX1 270 aa10.14□□□□□ -0.79
APP-213ENST00000464867 NRSN2Q9GZP1 204 aa10.14□□□□□ -0.79
APP-213ENST00000464867 MIR1-1HGQ9H1L0 117 aa10.14□□□□□ -0.79
APP-213ENST00000464867 IL21RQ9HBE5 538 aa10.14□□□□□ -0.79
APP-213ENST00000464867 GPAMQ9HCL2 828 aa10.14□□□□□ -0.79
APP-213ENST00000464867 CYP8B1Q9UNU6 501 aa10.14□□□□□ -0.79
APP-213ENST00000464867 KNL1Q8NG31 2342 aa10.14□□□□□ -0.79
APP-213ENST00000464867 AHCTF1Q8WYP5 2266 aa10.13□□□□□ -0.79
APP-213ENST00000464867 STK36Q9NRP7 1315 aa10.13□□□□□ -0.79
APP-213ENST00000464867 ANKRD17O75179 2603 aaKnown RBP10.13□□□□□ -0.79
APP-213ENST00000464867 ADAM23O75077 832 aa10.13□□□□□ -0.79
APP-213ENST00000464867 CSH1P0DML2 217 aa10.13□□□□□ -0.79
APP-213ENST00000464867 CSH2P0DML3 217 aa10.13□□□□□ -0.79
APP-213ENST00000464867 ODC1P11926 461 aa10.13□□□□□ -0.79
APP-213ENST00000464867 GP1BBP13224 206 aa10.13□□□□□ -0.79
APP-213ENST00000464867 GSPT1P15170 499 aaKnown RBP10.13□□□□□ -0.79
APP-213ENST00000464867 GABRG2P18507 467 aa10.13□□□□□ -0.79
APP-213ENST00000464867 EIF2DP41214 584 aaKnown RBP10.13□□□□□ -0.79
APP-213ENST00000464867 GRIA2P42262 883 aa10.13□□□□□ -0.79
APP-213ENST00000464867 GRK6P43250 576 aa10.13□□□□□ -0.79
APP-213ENST00000464867 PDE6CP51160 858 aa10.13□□□□□ -0.79
APP-213ENST00000464867 KCNB1Q14721 858 aa10.13□□□□□ -0.79
APP-213ENST00000464867 NECTIN1Q15223 517 aa10.13□□□□□ -0.79
APP-213ENST00000464867 EMC10Q5UCC4 262 aa10.13□□□□□ -0.79
APP-213ENST00000464867 ZNF574Q6ZN55 896 aaPredicted RBP10.13□□□□□ -0.79
APP-213ENST00000464867 DBX2Q6ZNG2 339 aa10.13□□□□□ -0.79
APP-213ENST00000464867 SPACA3Q8IXA5 215 aa10.13□□□□□ -0.79
APP-213ENST00000464867 FSIP1Q8NA03 581 aa10.13□□□□□ -0.79
APP-213ENST00000464867 SPPL2BQ8TCT7 592 aa10.13□□□□□ -0.79
APP-213ENST00000464867 SH3RF2Q8TEC5 729 aa10.13□□□□□ -0.79
APP-213ENST00000464867 HAS1Q92839 578 aa10.13□□□□□ -0.79
APP-213ENST00000464867 SEMA4CQ9C0C4 833 aa10.13□□□□□ -0.79
APP-213ENST00000464867 NUCKS1Q9H1E3 243 aaKnown RBP10.13□□□□□ -0.79
APP-213ENST00000464867 CDT1Q9H211 546 aa10.13□□□□□ -0.79
APP-213ENST00000464867 LINC00597Q9H2U6 94 aa10.13□□□□□ -0.79
APP-213ENST00000464867 ARHGEF4Q9NR80 690 aa10.13□□□□□ -0.79
APP-213ENST00000464867 PCDHA12Q9UN75 941 aa10.13□□□□□ -0.79
APP-213ENST00000464867 FNDC3AQ9Y2H6 1198 aaKnown RBP10.13□□□□□ -0.79
APP-213ENST00000464867 COL5A1P20908 1838 aaPredicted RBP10.12□□□□□ -0.79
APP-213ENST00000464867 FLNCQ14315 2725 aa10.12□□□□□ -0.79
APP-213ENST00000464867 TBC1D3BA6NDS4 549 aa10.12□□□□□ -0.79
APP-213ENST00000464867 ANTXRLA6NF34 631 aa10.12□□□□□ -0.79
APP-213ENST00000464867 XPOTO43592 962 aaKnown RBP10.12□□□□□ -0.79
APP-213ENST00000464867 EDN1P05305 212 aa10.12□□□□□ -0.79
APP-213ENST00000464867 HMGB1P09429 215 aaKnown RBP10.12□□□□□ -0.79
APP-213ENST00000464867 MCF2P10911 925 aa10.12□□□□□ -0.79
APP-213ENST00000464867 HAPLN1P10915 354 aaPredicted RBP10.12□□□□□ -0.79
APP-213ENST00000464867 HOXB2P14652 356 aa10.12□□□□□ -0.79
APP-213ENST00000464867 PAX3P23760 479 aa10.12□□□□□ -0.79
APP-213ENST00000464867 KIR2DL1P43626 348 aaPredicted RBP10.12□□□□□ -0.79
APP-213ENST00000464867 RESTQ13127 1097 aa10.12□□□□□ -0.79
APP-213ENST00000464867 RTP5Q14D33 572 aa10.12□□□□□ -0.79
APP-213ENST00000464867 C4orf17Q53FE4 359 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms