RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 GALK1P51570 392 aa27.4■■□□□ 1.98
U2AF1-206ENST00000464750 KIAA2013Q8IYS2 634 aa27.4■■□□□ 1.98
U2AF1-206ENST00000464750 SPATA20Q8TB22 786 aa27.4■■□□□ 1.98
U2AF1-206ENST00000464750 TIGD1Q96MW7 591 aa27.4■■□□□ 1.98
U2AF1-206ENST00000464750 NT5C1AQ9BXI3 368 aa27.4■■□□□ 1.98
U2AF1-206ENST00000464750 CSNK1G1Q9HCP0 422 aa27.4■■□□□ 1.98
U2AF1-206ENST00000464750 COMMD8Q9NX08 183 aa27.4■■□□□ 1.98
U2AF1-206ENST00000464750 IL37Q9NZH6 218 aa27.4■■□□□ 1.98
U2AF1-206ENST00000464750 GMIPQ9P107 970 aa27.4■■□□□ 1.98
U2AF1-206ENST00000464750 HOOK1Q9UJC3 728 aaKnown RBP27.4■■□□□ 1.98
U2AF1-206ENST00000464750 RNF40O75150 1001 aa27.39■■□□□ 1.98
U2AF1-206ENST00000464750 FAM200BP0CF97 657 aa27.39■■□□□ 1.98
U2AF1-206ENST00000464750 MAP3K7CLP57077 242 aa27.39■■□□□ 1.98
U2AF1-206ENST00000464750 MCCD1P59942 119 aaPredicted RBP27.39■■□□□ 1.98
U2AF1-206ENST00000464750 NR1H3Q13133 447 aa27.39■■□□□ 1.98
U2AF1-206ENST00000464750 HEATR6Q6AI08 1181 aaKnown RBP27.39■■□□□ 1.98
U2AF1-206ENST00000464750 FILIP1Q7Z7B0 1213 aa27.39■■□□□ 1.98
U2AF1-206ENST00000464750 CD101Q93033 1021 aa27.39■■□□□ 1.98
U2AF1-206ENST00000464750 CFAP97Q9P2B7 532 aa27.39■■□□□ 1.98
U2AF1-206ENST00000464750 CHORDC1Q9UHD1 332 aaPredicted RBP27.39■■□□□ 1.98
U2AF1-206ENST00000464750 SCAMP3O14828 347 aaKnown RBP27.38■■□□□ 1.97
U2AF1-206ENST00000464750 COCHO43405 550 aa27.38■■□□□ 1.97
U2AF1-206ENST00000464750 STX10O60499 249 aa27.38■■□□□ 1.97
U2AF1-206ENST00000464750 CILPO75339 1184 aa27.38■■□□□ 1.97
U2AF1-206ENST00000464750 HECTD3Q5T447 861 aa27.38■■□□□ 1.97
U2AF1-206ENST00000464750 DDX42Q86XP3 938 aaKnown RBP eCLIP27.38■■□□□ 1.97
U2AF1-206ENST00000464750 KIAA1958Q8N8K9 716 aa27.38■■□□□ 1.97
U2AF1-206ENST00000464750 SEMA4DQ92854 862 aa27.38■■□□□ 1.97
U2AF1-206ENST00000464750 HNRNPABQ99729 332 aaKnown RBP27.38■■□□□ 1.97
U2AF1-206ENST00000464750 MYOFQ9NZM1 2061 aa27.37■■□□□ 1.97
U2AF1-206ENST00000464750 FAM92AA1XBS5 289 aa27.37■■□□□ 1.97
U2AF1-206ENST00000464750 SLC16A3O15427 465 aaKnown RBP27.37■■□□□ 1.97
U2AF1-206ENST00000464750 HOXC13P31276 330 aa27.37■■□□□ 1.97
U2AF1-206ENST00000464750 PMS1P54277 932 aaKnown RBP27.37■■□□□ 1.97
U2AF1-206ENST00000464750 DCAF17Q5H9S7 520 aaPredicted RBP27.37■■□□□ 1.97
U2AF1-206ENST00000464750 SNX30Q5VWJ9 437 aa27.37■■□□□ 1.97
U2AF1-206ENST00000464750 ANKRD40Q6AI12 368 aa27.37■■□□□ 1.97
U2AF1-206ENST00000464750 LONP2Q86WA8 852 aa27.37■■□□□ 1.97
U2AF1-206ENST00000464750 ZC3H3Q8IXZ2 948 aaKnown RBP27.37■■□□□ 1.97
U2AF1-206ENST00000464750 FBXL13Q8NEE6 735 aa27.37■■□□□ 1.97
U2AF1-206ENST00000464750 WHAMMQ8TF30 809 aa27.37■■□□□ 1.97
U2AF1-206ENST00000464750 CCSER2Q9H7U1 834 aa27.37■■□□□ 1.97
U2AF1-206ENST00000464750 TRIM49BA6NDI0 452 aa27.36■■□□□ 1.97
U2AF1-206ENST00000464750 ATG13O75143 517 aa27.36■■□□□ 1.97
U2AF1-206ENST00000464750 ZDHHC11BP0C7U3 371 aa27.36■■□□□ 1.97
U2AF1-206ENST00000464750 TUBP50607 506 aa27.36■■□□□ 1.97
U2AF1-206ENST00000464750 FKBP3Q00688 224 aaKnown RBP27.36■■□□□ 1.97
U2AF1-206ENST00000464750 FBXO43Q4G163 708 aa27.36■■□□□ 1.97
U2AF1-206ENST00000464750 TCERG1LQ5VWI1 586 aa27.36■■□□□ 1.97
U2AF1-206ENST00000464750 CLEC20AQ6ZU45 233 aa27.36■■□□□ 1.97
U2AF1-206ENST00000464750 SECISBP2LQ93073 1101 aaKnown RBP27.36■■□□□ 1.97
U2AF1-206ENST00000464750 JAKMIP2Q96AA8 810 aa27.36■■□□□ 1.97
U2AF1-206ENST00000464750 CYFIP2Q96F07 1278 aa27.36■■□□□ 1.97
U2AF1-206ENST00000464750 GTPBP4Q9BZE4 634 aaKnown RBP27.36■■□□□ 1.97
U2AF1-206ENST00000464750 FBXO44Q9H4M3 255 aa27.36■■□□□ 1.97
U2AF1-206ENST00000464750 RAB20Q9NX57 234 aa27.36■■□□□ 1.97
U2AF1-206ENST00000464750 RAB23Q9ULC3 237 aa27.36■■□□□ 1.97
U2AF1-206ENST00000464750 SLC9A3R1O14745 358 aaPredicted RBP27.35■■□□□ 1.97
U2AF1-206ENST00000464750 CYP17A1P05093 508 aa27.35■■□□□ 1.97
U2AF1-206ENST00000464750 HOXA6P31267 233 aa27.35■■□□□ 1.97
U2AF1-206ENST00000464750 LRRC63Q05C16 580 aa27.35■■□□□ 1.97
U2AF1-206ENST00000464750 LPAL2Q16609 132 aa27.35■■□□□ 1.97
U2AF1-206ENST00000464750 PRR23BQ6ZRT6 265 aa27.35■■□□□ 1.97
U2AF1-206ENST00000464750 GPRIN1Q7Z2K8 1008 aa27.35■■□□□ 1.97
U2AF1-206ENST00000464750 EZH1Q92800 747 aaPredicted RBP27.35■■□□□ 1.97
U2AF1-206ENST00000464750 ZFRQ96KR1 1074 aaKnown RBP27.35■■□□□ 1.97
U2AF1-206ENST00000464750 DNAI2Q9GZS0 605 aa27.35■■□□□ 1.97
U2AF1-206ENST00000464750 GMEB2Q9UKD1 530 aa27.35■■□□□ 1.97
U2AF1-206ENST00000464750 SRSF5Q13243 272 aaKnown RBP27.34■■□□□ 1.97
U2AF1-206ENST00000464750 ZNF394Q53GI3 561 aa27.34■■□□□ 1.97
U2AF1-206ENST00000464750 FAXDC2Q96IV6 333 aa27.34■■□□□ 1.97
U2AF1-206ENST00000464750 NACA2Q9H009 215 aa27.34■■□□□ 1.97
U2AF1-206ENST00000464750 SLC8A2Q9UPR5 921 aa27.34■■□□□ 1.97
U2AF1-206ENST00000464750 PSMA7O14818 248 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 HRO43593 1189 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 CNR2P34972 360 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 OPRD1P41143 372 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 STIM1Q13586 685 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 SIM2Q14190 667 aaPredicted RBP27.33■■□□□ 1.97
U2AF1-206ENST00000464750 DHCR24Q15392 516 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 GAB4Q2WGN9 574 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 CBWD6Q4V339 395 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 CBWD3Q5JTY5 395 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 CBWD5Q5RIA9 395 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 ISM2Q6H9L7 571 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 WDR5BQ86VZ2 330 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 RPLP0P6Q8NHW5 317 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 TLR8Q9NR97 1041 aaKnown RBP27.33■■□□□ 1.97
U2AF1-206ENST00000464750 MAN1B1Q9UKM7 699 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 DMXL1Q9Y485 3027 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 EML5Q05BV3 1969 aa27.33■■□□□ 1.97
U2AF1-206ENST00000464750 CEP250Q9BV73 2442 aa27.32■■□□□ 1.96
U2AF1-206ENST00000464750 E2F8A0AVK6 867 aa27.32■■□□□ 1.96
U2AF1-206ENST00000464750 HHLA1C9JL84 531 aa27.32■■□□□ 1.96
U2AF1-206ENST00000464750 TLR5O60602 858 aa27.32■■□□□ 1.96
U2AF1-206ENST00000464750 ID4P47928 161 aa27.32■■□□□ 1.96
U2AF1-206ENST00000464750 PGFP49763 221 aa27.32■■□□□ 1.96
U2AF1-206ENST00000464750 ELOA2Q8IYF1 753 aaPredicted RBP27.32■■□□□ 1.96
U2AF1-206ENST00000464750 ADGRG2Q8IZP9 1017 aa27.32■■□□□ 1.96
U2AF1-206ENST00000464750 TTC39CQ8N584 583 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms