RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 FBXO42Q6P3S6 717 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 KRT73Q86Y46 540 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 RASAL3Q86YV0 1011 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 LIX1LQ8IVB5 337 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 OR2C3Q8N628 320 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 BOLLQ8N9W6 283 aaKnown RBP7.11□□□□□ -1.27
PTCD3-205ENST00000464541 FANCBQ8NB91 859 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 ABHD11Q8NFV4 315 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 FAM227BQ96M60 508 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 PRDM13Q9H4Q3 707 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 TBC1D23Q9NUY8 699 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 WNT6Q9Y6F9 365 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 KCNQ3O43525 872 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 PPFIA2O75334 1257 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 FGF18O76093 207 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 IGLV2-14P01704 120 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 MYL3P08590 195 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 CD19P15391 556 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 GATMP50440 423 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 COPAP53621 1224 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 SUMO2P61956 95 aaKnown RBP7.1□□□□□ -1.27
PTCD3-205ENST00000464541 NHLH1Q02575 133 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 SLC29A4Q7RTT9 530 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 CCDC138Q96M89 665 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 RIPOR3Q96MK2 946 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 MAGEB5Q9BZ81 275 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 ZBTB26Q9HCK0 441 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 IL17RBQ9NRM6 502 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 ASB6Q9NWX5 421 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 CCNL1Q9UK58 526 aaPredicted RBP7.1□□□□□ -1.27
PTCD3-205ENST00000464541 ADAMTS5Q9UNA0 930 aa7.1□□□□□ -1.27
PTCD3-205ENST00000464541 SNX2O60749 519 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 C1QL1O75973 258 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 MYCLP12524 364 aaPredicted RBP7.09□□□□□ -1.27
PTCD3-205ENST00000464541 IDEP14735 1019 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 TNFSF4P23510 183 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 CTGFP29279 349 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 GKP32189 559 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 NEK3P51956 506 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 ITGA8P53708 1063 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 STK3Q13188 491 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 CLCA4Q14CN2 919 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 FAM209BQ5JX69 171 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 MANEALQ5VSG8 457 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 KLHDC7AQ5VTJ3 777 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 IZUMO3Q5VZ72 239 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 RD3Q7Z3Z2 195 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 DNAJC10Q8IXB1 793 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 SIRT6Q8N6T7 355 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 CCDC150Q8NCX0 1101 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 ZNF384Q8TF68 577 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 GJA10Q969M2 543 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 THAP7Q9BT49 309 aaPredicted RBP7.09□□□□□ -1.27
PTCD3-205ENST00000464541 SELENOOQ9BVL4 669 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 R3HDMLQ9H3Y0 253 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 VPS51Q9UID3 782 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 HPSEQ9Y251 543 aa7.09□□□□□ -1.27
PTCD3-205ENST00000464541 CCDC194A0A1B0GVG4 234 aa7.08□□□□□ -1.28
PTCD3-205ENST00000464541 SUV39H1O43463 412 aa7.08□□□□□ -1.28
PTCD3-205ENST00000464541 JTBO76095 146 aa7.08□□□□□ -1.28
PTCD3-205ENST00000464541 ENGP17813 658 aa7.08□□□□□ -1.28
PTCD3-205ENST00000464541 BTKQ06187 659 aa7.08□□□□□ -1.28
PTCD3-205ENST00000464541 CYP1B1Q16678 543 aa7.08□□□□□ -1.28
PTCD3-205ENST00000464541 ARL13BQ3SXY8 428 aa7.08□□□□□ -1.28
PTCD3-205ENST00000464541 PCID2Q5JVF3 399 aa7.08□□□□□ -1.28
PTCD3-205ENST00000464541 TMEM63BQ5T3F8 832 aa7.08□□□□□ -1.28
PTCD3-205ENST00000464541 DENND2CQ68D51 928 aa7.08□□□□□ -1.28
PTCD3-205ENST00000464541 HIBCHQ6NVY1 386 aaPredicted RBP7.08□□□□□ -1.28
PTCD3-205ENST00000464541 ARHGEF25Q86VW2 580 aa7.08□□□□□ -1.28
PTCD3-205ENST00000464541 HIST1H2AAQ96QV6 131 aa7.08□□□□□ -1.28
PTCD3-205ENST00000464541 CRAMP1Q96RY5 1269 aa7.08□□□□□ -1.28
PTCD3-205ENST00000464541 ELAC2Q9BQ52 826 aaKnown RBP7.08□□□□□ -1.28
PTCD3-205ENST00000464541 ZNF213O14771 459 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 PMPCBO75439 489 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 VNN1O95497 513 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 C1RP00736 705 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 HNRNPCP07910 306 aaKnown RBP eCLIP7.07□□□□□ -1.282e-6■□□□□ 11.2
PTCD3-205ENST00000464541 IFIT2P09913 472 aaKnown RBP7.07□□□□□ -1.28
PTCD3-205ENST00000464541 HGFP14210 728 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 SLC5A2P31639 672 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 NANOS3P60323 173 aaKnown RBP7.07□□□□□ -1.28
PTCD3-205ENST00000464541 E2F1Q01094 437 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 KCNAB1Q14722 419 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 ST3GAL2Q16842 350 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 DGKKQ5KSL6 1271 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 SUMO4Q6EEV6 95 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 MRNIPQ6NTE8 343 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 SFTPA1Q8IWL2 248 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 FAM186BQ8IYM0 893 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 MBD3L2Q8NHZ7 208 aaPredicted RBP7.07□□□□□ -1.28
PTCD3-205ENST00000464541 DEPTORQ8TB45 409 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 PARD3BQ8TEW8 1205 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 SNX27Q96L92 541 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 PRR25Q96S07 402 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 NLRC4Q9NPP4 1024 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 NKX1-2Q9UD57 310 aaPredicted RBP7.07□□□□□ -1.28
PTCD3-205ENST00000464541 STEAP1Q9UHE8 339 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 ADAM21Q9UKJ8 722 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 AMFRQ9UKV5 643 aa7.07□□□□□ -1.28
PTCD3-205ENST00000464541 RIMKLBQ9ULI2 386 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms