RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 M0QZQ0 153 aa15.23■□□□□ 0.03
COL5A1-205ENST00000464187 ODC1P11926 461 aa15.23■□□□□ 0.03
COL5A1-205ENST00000464187 ACAT1P24752 427 aaKnown RBP15.23■□□□□ 0.03
COL5A1-205ENST00000464187 GPD2P43304 727 aa15.23■□□□□ 0.03
COL5A1-205ENST00000464187 SYDE1Q6ZW31 735 aaPredicted RBP15.23■□□□□ 0.03
COL5A1-205ENST00000464187 UBA3Q8TBC4 463 aa15.23■□□□□ 0.03
COL5A1-205ENST00000464187 GRK7Q8WTQ7 553 aa15.23■□□□□ 0.03
COL5A1-205ENST00000464187 MRPL9Q9BYD2 267 aaKnown RBP15.23■□□□□ 0.03
COL5A1-205ENST00000464187 DNAI2Q9GZS0 605 aa15.23■□□□□ 0.03
COL5A1-205ENST00000464187 SEMA4AQ9H3S1 761 aa15.23■□□□□ 0.03
COL5A1-205ENST00000464187 KLHL11Q9NVR0 708 aa15.23■□□□□ 0.03
COL5A1-205ENST00000464187 BCCIPQ9P287 314 aaKnown RBP eCLIP15.23■□□□□ 0.03
COL5A1-205ENST00000464187 CYTH4Q9UIA0 394 aa15.23■□□□□ 0.03
COL5A1-205ENST00000464187 TMEM189-UBE2V1I3L0A0 370 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 IVDP26440 423 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 MDH1P40925 334 aaKnown RBP15.22■□□□□ 0.03
COL5A1-205ENST00000464187 PSMC1P62191 440 aaKnown RBP15.22■□□□□ 0.03
COL5A1-205ENST00000464187 GOLGA7BQ2TAP0 167 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 CYP4A22Q5TCH4 519 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 ERICH1Q86X53 443 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 B3GALNT2Q8NCR0 500 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 TLCD1Q96CP7 247 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 SUSD3Q96L08 255 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 RABEP2Q9H5N1 569 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 HCSTQ9UBK5 93 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 ASIC3Q9UHC3 531 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 NOVA2Q9UNW9 492 aaKnown RBP15.22■□□□□ 0.03
COL5A1-205ENST00000464187 ATP2C2O75185 946 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 CYP11A1P05108 521 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 ACRP10323 421 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 CCDC130P13994 396 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 LSP1P33241 339 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 CALCOCO2Q13137 446 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 SLC29A2Q14542 456 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 SLMAPQ14BN4 828 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 PTPN20Q4JDL3 420 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 ATP13A4Q4VNC1 1196 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 KIAA0319Q5VV43 1072 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 ARHGAP17Q68EM7 881 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 RHBDF2Q6PJF5 856 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 HOOK3Q86VS8 718 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 TTC30AQ86WT1 665 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 ARFGAP2Q8N6H7 521 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 C3orf20Q8ND61 904 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 BCAS4Q8TDM0 211 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 SNF8Q96H20 258 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 CCDC114Q96M63 670 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 SLITRK1Q96PX8 696 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 FAM118BQ9BPY3 351 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 AAASQ9NRG9 546 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 HESX1Q9UBX0 185 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 RSPH14Q9UHP6 348 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 SLC12A6Q9UHW9 1150 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 DSEQ9UL01 958 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 NEU2Q9Y3R4 380 aa15.22■□□□□ 0.03
COL5A1-205ENST00000464187 F8VP50 259 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 PI4K2BG5E9Z4 385 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 NRP1O14786 923 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 RIPK2O43353 540 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 DGKIO75912 1065 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 GAS8O95995 478 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 KRT1P04264 644 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 ALDH2P05091 517 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 PFKMP08237 780 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 RARGP13631 454 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 PTPN1P18031 435 aaKnown RBP15.21■□□□□ 0.03
COL5A1-205ENST00000464187 MAGOHP61326 146 aaKnown RBP15.21■□□□□ 0.03
COL5A1-205ENST00000464187 PPP2R2AP63151 447 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 TAP1Q03518 808 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 TRIP13Q15645 432 aaPredicted RBP15.21■□□□□ 0.03
COL5A1-205ENST00000464187 CCNG2Q16589 344 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 CCDC142Q17RM4 750 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 PKDCCQ504Y2 493 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 DCUN1D2Q6PH85 259 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 METTL23Q86XA0 190 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 LRRC43Q8N309 656 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 NIPA2Q8N8Q9 360 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 ATL2Q8NHH9 583 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 SPATA18Q8TC71 538 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 SLC2A14Q8TDB8 520 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 TOP1MTQ969P6 601 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 RBM41Q96IZ5 413 aaKnown RBP15.21■□□□□ 0.03
COL5A1-205ENST00000464187 PKNOX2Q96KN3 472 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 CPXM1Q96SM3 734 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 HOMER3Q9NSC5 361 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 TJP2Q9UDY2 1190 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 PRKAG2Q9UGJ0 569 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 LCMT1Q9UIC8 334 aa15.21■□□□□ 0.03
COL5A1-205ENST00000464187 ARHGEF37A1IGU5 675 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 TADA2AO75478 443 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 ADORA2BP29275 332 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 ADCY2Q08462 1091 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 SKIDA1Q1XH10 827 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 LRRC38Q5VT99 294 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 CCDC25Q86WR0 208 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 RCOR2Q8IZ40 523 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 SYT15Q9BQS2 421 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 STRIP2Q9ULQ0 834 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 TRAPPC3O43617 180 aa15.2■□□□□ 0.02
COL5A1-205ENST00000464187 EFCAB14O75071 495 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms