RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 HMGXB4Q9UGU5 601 aa21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 DMXL1Q9Y485 3027 aa21.78■■□□□ 1.08
PDLIM4-205ENST00000463615 OPRD1P41143 372 aa21.77■■□□□ 1.08
PDLIM4-205ENST00000463615 GCLMP48507 274 aa21.77■■□□□ 1.08
PDLIM4-205ENST00000463615 BECN1Q14457 450 aa21.77■■□□□ 1.08
PDLIM4-205ENST00000463615 HECTD3Q5T447 861 aa21.77■■□□□ 1.08
PDLIM4-205ENST00000463615 SYT13Q7L8C5 426 aa21.77■■□□□ 1.08
PDLIM4-205ENST00000463615 ENGASEQ8NFI3 743 aa21.77■■□□□ 1.08
PDLIM4-205ENST00000463615 SPATA20Q8TB22 786 aa21.77■■□□□ 1.08
PDLIM4-205ENST00000463615 SLC2A14Q8TDB8 520 aa21.77■■□□□ 1.08
PDLIM4-205ENST00000463615 ZFRQ96KR1 1074 aaKnown RBP21.77■■□□□ 1.08
PDLIM4-205ENST00000463615 HNRNPABQ99729 332 aaKnown RBP21.77■■□□□ 1.08
PDLIM4-205ENST00000463615 FAM124BQ9H5Z6 455 aaPredicted RBP21.77■■□□□ 1.08
PDLIM4-205ENST00000463615 PNPLA8Q9NP80 782 aa21.77■■□□□ 1.08
PDLIM4-205ENST00000463615 SLC8A2Q9UPR5 921 aa21.77■■□□□ 1.08
PDLIM4-205ENST00000463615 E2F8A0AVK6 867 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 PRR5-ARHGAP8B1AHC4 643 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 COCHO43405 550 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 CYP17A1P05093 508 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 TRIM49P0CI25 452 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 TRIM49CP0CI26 452 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 CCDC130P13994 396 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 TRIM21P19474 475 aaKnown RBP21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 SDHBP21912 280 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 EIF2DP41214 584 aaKnown RBP21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 NUCB2P80303 420 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 ARHGAP8P85298 464 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 LMNB2Q03252 620 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 KRT39Q6A163 491 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 FILIP1Q7Z7B0 1213 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 OTUB2Q96DC9 234 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 GSDMAQ96QA5 445 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 NT5C1AQ9BXI3 368 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 NIF3L1Q9GZT8 377 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 FBXO44Q9H4M3 255 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 RMND1Q9NWS8 449 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 TBC1D14Q9P2M4 693 aa21.76■■□□□ 1.07
PDLIM4-205ENST00000463615 CILPO75339 1184 aa21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 BEST1O76090 585 aa21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 CLSTN1O94985 981 aa21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 ABL1P00519 1130 aa21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 MBL2P11226 248 aaPredicted RBP21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 HEATR6Q6AI08 1181 aaKnown RBP21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 ZC3H3Q8IXZ2 948 aaKnown RBP21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 C12orf29Q8N999 325 aa21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 TTC16Q8NEE8 873 aa21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 WHAMMQ8TF30 809 aa21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 GAB3Q8WWW8 586 aa21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 ACDQ96AP0 544 aa21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 TWNKQ96RR1 684 aa21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 GTPBP4Q9BZE4 634 aaKnown RBP21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 PARD6AQ9NPB6 346 aa21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 CFAP97Q9P2B7 532 aa21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 CHORDC1Q9UHD1 332 aaPredicted RBP21.75■■□□□ 1.07
PDLIM4-205ENST00000463615 KIAA1549LQ6ZVL6 1849 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 A0A0A0MRY4 1105 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 FAM200BP0CF97 657 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 HOXC13P31276 330 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 IFRD2Q12894 506 aaPredicted RBP21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 SRSF5Q13243 272 aaKnown RBP21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 PNOCQ13519 176 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 DHCR24Q15392 516 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 RHBDF2Q6PJF5 856 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 PRR23BQ6ZRT6 265 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 CLEC20AQ6ZU45 233 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 TTC39CQ8N584 583 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 LOXL4Q96JB6 756 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 TIGD1Q96MW7 591 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 SMPD4Q9NXE4 827 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 GMIPQ9P107 970 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 EBF1Q9UH73 591 aa21.74■■□□□ 1.07
PDLIM4-205ENST00000463615 DNAH14Q0VDD8 3507 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 HHLA1C9JL84 531 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 CETN3O15182 167 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 STX10O60499 249 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 MAP3K7CLP57077 242 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 ORC1Q13415 861 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 ZNF658Q5TYW1 1059 aaPredicted RBP21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 ELOA2Q8IYF1 753 aaPredicted RBP21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 CCDC150Q8NCX0 1101 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 RPLP0P6Q8NHW5 317 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 USP33Q8TEY7 942 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 CYFIP2Q96F07 1278 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 DNAI2Q9GZS0 605 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 CCSER2Q9H7U1 834 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 CYLDQ9NQC7 956 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 FAM49BQ9NUQ9 324 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 SCML2Q9UQR0 700 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 MYO16Q9Y6X6 1858 aa21.73■■□□□ 1.07
PDLIM4-205ENST00000463615 K7EQS6 105 aa21.72■■□□□ 1.07
PDLIM4-205ENST00000463615 SLC16A3O15427 465 aaKnown RBP21.72■■□□□ 1.07
PDLIM4-205ENST00000463615 FOXD2O60548 495 aaPredicted RBP21.72■■□□□ 1.07
PDLIM4-205ENST00000463615 ADH1CP00326 375 aa21.72■■□□□ 1.07
PDLIM4-205ENST00000463615 PRCPP42785 496 aa21.72■■□□□ 1.07
PDLIM4-205ENST00000463615 LPAL2Q16609 132 aa21.72■■□□□ 1.07
PDLIM4-205ENST00000463615 RSPO4Q2I0M5 234 aaPredicted RBP21.72■■□□□ 1.07
PDLIM4-205ENST00000463615 SMYD4Q8IYR2 804 aaPredicted RBP21.72■■□□□ 1.07
PDLIM4-205ENST00000463615 ZNF276Q8N554 614 aa21.72■■□□□ 1.07
PDLIM4-205ENST00000463615 FAM160A2Q8N612 972 aaPredicted RBP21.72■■□□□ 1.07
PDLIM4-205ENST00000463615 FBXL13Q8NEE6 735 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms