RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TMEM119Q4V9L6 283 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 SDE2Q6IQ49 451 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 GLRX5Q86SX6 157 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 SLC41A1Q8IVJ1 513 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 TOP6BLQ8N6T0 577 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 LRRC52Q8N7C0 313 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.38■□□□□ 0.53
TOP3A-202ENST00000461127 GDAP2Q9NXN4 497 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 R3HCC1Q9Y3T6 440 aaKnown RBP18.38■□□□□ 0.53
TOP3A-202ENST00000461127 STYXL1Q9Y6J8 313 aa18.38■□□□□ 0.53
TOP3A-202ENST00000461127 VWA3AA6NCI4 1184 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 ZNF840PA6NDX5 716 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 TISP43B9A030 160 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 SCAMP3O14828 347 aaKnown RBP18.37■□□□□ 0.53
TOP3A-202ENST00000461127 NTSR1P30989 418 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 C19orf57Q0VDD7 668 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 WDR45BQ5MNZ6 344 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 LY6G5CQ5SRR4 150 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 FAM171BQ6P995 826 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 OSTM1Q86WC4 334 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 CSGALNACT2Q8N6G5 542 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 FOXJ1Q92949 421 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 OTUB2Q96DC9 234 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 CALML4Q96GE6 196 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 RNF38Q9H0F5 515 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 KIAA1522Q9P206 1035 aaPredicted RBP18.37■□□□□ 0.53
TOP3A-202ENST00000461127 DEC1Q9P2X7 70 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 CYP8B1Q9UNU6 501 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 KIF3AQ9Y496 699 aa18.37■□□□□ 0.53
TOP3A-202ENST00000461127 GABRDO14764 452 aa18.36■□□□□ 0.53
TOP3A-202ENST00000461127 TRIM66O15016 1216 aa18.36■□□□□ 0.53
TOP3A-202ENST00000461127 SLC26A4O43511 780 aa18.36■□□□□ 0.53
TOP3A-202ENST00000461127 KRT19P08727 400 aa18.36■□□□□ 0.53
TOP3A-202ENST00000461127 MBL2P11226 248 aaPredicted RBP18.36■□□□□ 0.53
TOP3A-202ENST00000461127 BDNFP23560 247 aa18.36■□□□□ 0.53
TOP3A-202ENST00000461127 GJB2P29033 226 aa18.36■□□□□ 0.53
TOP3A-202ENST00000461127 CRELD2Q6UXH1 353 aaPredicted RBP18.36■□□□□ 0.53
TOP3A-202ENST00000461127 SLCO6A1Q86UG4 719 aa18.36■□□□□ 0.53
TOP3A-202ENST00000461127 C1orf127Q8N9H9 656 aa18.36■□□□□ 0.53
TOP3A-202ENST00000461127 ADAM32Q8TC27 787 aa18.36■□□□□ 0.53
TOP3A-202ENST00000461127 SETD7Q8WTS6 366 aaKnown RBP18.36■□□□□ 0.53
TOP3A-202ENST00000461127 ZNF419Q96HQ0 510 aaPredicted RBP18.36■□□□□ 0.53
TOP3A-202ENST00000461127 SYT15Q9BQS2 421 aa18.36■□□□□ 0.53
TOP3A-202ENST00000461127 TTLL2Q9BWV7 592 aa18.36■□□□□ 0.53
TOP3A-202ENST00000461127 ITGA11Q9UKX5 1188 aa18.36■□□□□ 0.53
TOP3A-202ENST00000461127 PTPRBP23467 1997 aa18.35■□□□□ 0.53
TOP3A-202ENST00000461127 OLFM2O95897 454 aa18.35■□□□□ 0.53
TOP3A-202ENST00000461127 PLCG1P19174 1290 aa18.35■□□□□ 0.53
TOP3A-202ENST00000461127 USP46P62068 366 aa18.35■□□□□ 0.53
TOP3A-202ENST00000461127 GRIK2Q13002 908 aa18.35■□□□□ 0.53
TOP3A-202ENST00000461127 C10orf76Q5T2E6 689 aa18.35■□□□□ 0.53
TOP3A-202ENST00000461127 TMPRSS7Q7RTY8 843 aa18.35■□□□□ 0.53
TOP3A-202ENST00000461127 PHTF2Q8N3S3 785 aa18.35■□□□□ 0.53
TOP3A-202ENST00000461127 NAT16Q8N8M0 369 aa18.35■□□□□ 0.53
TOP3A-202ENST00000461127 MYLPFQ96A32 169 aa18.35■□□□□ 0.53
TOP3A-202ENST00000461127 SLITRK1Q96PX8 696 aa18.35■□□□□ 0.53
TOP3A-202ENST00000461127 PCOLCE2Q9UKZ9 415 aa18.35■□□□□ 0.53
TOP3A-202ENST00000461127 CDH9Q9ULB4 789 aa18.35■□□□□ 0.53
TOP3A-202ENST00000461127 GOLGA4Q13439 2230 aaKnown RBP18.35■□□□□ 0.53
TOP3A-202ENST00000461127 E2F8A0AVK6 867 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 HCRTO43612 131 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 CBFA2T3O75081 653 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 TULP3O75386 442 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 OAS1P00973 400 aaKnown RBP18.34■□□□□ 0.53
TOP3A-202ENST00000461127 NDUFV2P19404 249 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 WASP42768 502 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 NOP14P78316 857 aaKnown RBP18.34■□□□□ 0.53
TOP3A-202ENST00000461127 RBP5P82980 135 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 CYP27A1Q02318 531 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 MYO1EQ12965 1108 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 RILPL1Q5EBL4 403 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 TDRD10Q5VZ19 366 aaKnown RBP18.34■□□□□ 0.53
TOP3A-202ENST00000461127 DPH6Q7L8W6 267 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 CHPFQ8IZ52 775 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 TERB1Q8NA31 727 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 HVCN1Q96D96 273 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 AK8Q96MA6 479 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 UBL7Q96S82 380 aaPredicted RBP18.34■□□□□ 0.53
TOP3A-202ENST00000461127 FIZ1Q96SL8 496 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 FAM213AQ9BRX8 229 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 ST6GALNAC4Q9H4F1 302 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 BPTFQ12830 3046 aa18.34■□□□□ 0.53
TOP3A-202ENST00000461127 A0A1W2PQF6 199 aa18.33■□□□□ 0.52
TOP3A-202ENST00000461127 HOXC11O43248 304 aaPredicted RBP18.33■□□□□ 0.52
TOP3A-202ENST00000461127 ATP2C2O75185 946 aa18.33■□□□□ 0.52
TOP3A-202ENST00000461127 UBA7P41226 1012 aa18.33■□□□□ 0.52
TOP3A-202ENST00000461127 PSMC1P62191 440 aaKnown RBP18.33■□□□□ 0.52
TOP3A-202ENST00000461127 SOWAHAQ2M3V2 549 aa18.33■□□□□ 0.52
TOP3A-202ENST00000461127 ANO4Q32M45 955 aa18.33■□□□□ 0.52
TOP3A-202ENST00000461127 ARL6IP4Q66PJ3 421 aaKnown RBP18.33■□□□□ 0.52
TOP3A-202ENST00000461127 BRSK2Q8IWQ3 736 aa18.33■□□□□ 0.52
TOP3A-202ENST00000461127 SCUBE3Q8IX30 993 aa18.33■□□□□ 0.52
TOP3A-202ENST00000461127 ETFBKMTQ8IXQ9 262 aa18.33■□□□□ 0.52
TOP3A-202ENST00000461127 GALNT15Q8N3T1 639 aa18.33■□□□□ 0.52
TOP3A-202ENST00000461127 RASSF8Q8NHQ8 419 aa18.33■□□□□ 0.52
TOP3A-202ENST00000461127 IPO4Q8TEX9 1081 aaKnown RBP18.33■□□□□ 0.52
TOP3A-202ENST00000461127 CDC6Q99741 560 aa18.33■□□□□ 0.52
TOP3A-202ENST00000461127 CACNA2D2Q9NY47 1150 aa18.33■□□□□ 0.52
TOP3A-202ENST00000461127 SH3BP1Q9Y3L3 701 aa18.33■□□□□ 0.52
TOP3A-202ENST00000461127 STARD13Q9Y3M8 1113 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms