RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 RENBPP51606 427 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 PDIA2Q13087 525 aaKnown RBP11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 FAM47EQ6ZV65 393 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 RFWD2Q8NHY2 731 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 C1orf54Q8WWF1 131 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 CPA5Q8WXQ8 436 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 SYT15Q9BQS2 421 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 C1QTNF7Q9BXJ2 289 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 ASPSCR1Q9BZE9 553 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 SLC40A1Q9NP59 571 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 CASS4Q9NQ75 786 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 RWDD3Q9Y3V2 267 aa11.12□□□□□ -0.63
AMBRA1-202ENST00000458649 A0A087X0T9 212 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 ACKR2O00590 384 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 FAM228BP0C875 321 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 SSTR3P32745 418 aaPredicted RBP11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 SERPINB9P50453 376 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 PSMC6P62333 389 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 HIF1AQ16665 826 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 TRIM16LQ309B1 348 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 TMEM119Q4V9L6 283 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 SLC45A4Q5BKX6 768 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 FAM171A1Q5VUB5 890 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 GJB7Q6PEY0 223 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 SLC30A10Q6XR72 485 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 CYP2W1Q8TAV3 490 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 SLC26A7Q8TE54 656 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 YIPF2Q9BWQ6 316 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 SEPT3Q9UH03 358 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 TTC7AQ9ULT0 858 aaPredicted RBP11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 SPDYE5A6NIY4 337 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 C2orf81A6NN90 581 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 FAM86B1E9PN63 330 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 M0QYT0 321 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 RHOCP08134 193 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 FAM86B2P0C5J1 330 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 NCF2P19878 526 aaPredicted RBP11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 ARSEP51690 589 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 IZUMO3Q5VZ72 239 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 AGGF1Q8N302 714 aaeCLIP11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 FEZF2Q8TBJ5 459 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 ZNF473Q8WTR7 871 aaKnown RBP11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 CCT8L2Q96SF2 557 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 COG4Q9H9E3 785 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 SELENONQ9NZV5 590 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 APOBEC2Q9Y235 224 aaKnown RBP11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 L3MBTL1Q9Y468 752 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 XRN1Q8IZH2 1706 aaKnown RBP11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 RNF103-CHMP3A0A140T963 221 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 LSM8O95777 96 aaKnown RBP11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 HMOX2P30519 316 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 BST2Q10589 180 aaKnown RBP11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 HIST2H2ACQ16777 129 aaPredicted RBP11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 FASTKD1Q53R41 847 aaKnown RBP11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 HIST2H2AA3Q6FI13 130 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 CCNYL1Q8N7R7 359 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 ZNF263O14978 683 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 BRAFP15056 766 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 DEFA1P59665 94 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 DEFA3P59666 94 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 MAPRE2Q15555 327 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 RBBP7Q16576 425 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 IRAK1BP1Q5VVH5 260 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 CCNI2Q6ZMN8 369 aaPredicted RBP11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 HORMAD1Q86X24 394 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 UBA3Q8TBC4 463 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 CYFIP2Q96F07 1278 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 TSPAN18Q96SJ8 248 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 CD248Q9HCU0 757 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 BLOC1S4Q9NUP1 217 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 TFR2Q9UP52 801 aa11.11□□□□□ -0.63
AMBRA1-202ENST00000458649 SLC12A8A0AV02 714 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 CAPN15O75808 1086 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 AKAP3O75969 853 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 CTNNB1P35222 781 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 DMPKQ09013 629 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 MORF4L2Q15014 288 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 CELF3Q5SZQ8 465 aaKnown RBP11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 DDX42Q86XP3 938 aaKnown RBP eCLIP11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 MIB1Q86YT6 1006 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 PTPRN2Q92932 1015 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 MTMR9Q96QG7 549 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 TEKT2Q9UIF3 430 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 PHF20L1A8MW92 1017 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 ADH1AP07327 375 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 EFL1Q7Z2Z2 1120 aaKnown RBP11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 NCLNQ969V3 563 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 CIPCQ9C0C6 399 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 MTMR12Q9C0I1 747 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 RBM12Q9NTZ6 932 aaKnown RBP11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 VPS28Q9UK41 221 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 FBXL5Q9UKA1 691 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 ALG6Q9Y672 507 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 RASA4BC9J798 803 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 RASA4O43374 803 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 KCNA2P16389 499 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 MRPS6P82932 125 aaKnown RBP11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 PPIGQ13427 754 aaKnown RBP eCLIP11.1□□□□□ -0.633e-7■■□□□ 12.3
AMBRA1-202ENST00000458649 DGKZQ13574 1117 aa11.1□□□□□ -0.63
AMBRA1-202ENST00000458649 ACSF2Q96CM8 615 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms