RNA–Protein interactions for RNA: ENST00000456986.5

NEDD4L-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 8,436 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-209ENST00000456986 KLHL12Q53G59 568 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 ATF7IP2Q5U623 682 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 DCUN1D1Q96GG9 259 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 TBCBQ99426 244 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 B2RBV5 119 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 DFFAO00273 331 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 PGM3O95394 542 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 NME3Q13232 169 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 TMC3Q7Z5M5 1100 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 CPA5Q8WXQ8 436 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 TRIM39Q9HCM9 518 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 GDF3Q9NR23 364 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 CLUHO75153 1309 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 CCDC166P0CW27 439 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 AP1S1P61966 158 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 NSUN2Q08J23 767 aaKnown RBP eCLIP8.8□□□□□ -1
NEDD4L-209ENST00000456986 NAA30Q147X3 362 aaPredicted RBP8.8□□□□□ -1
NEDD4L-209ENST00000456986 USP39Q53GS9 565 aaKnown RBP8.8□□□□□ -1
NEDD4L-209ENST00000456986 MFSD14CQ5VZR4 134 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 SEL1L3Q68CR1 1132 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 RNASE11Q8TAA1 199 aaKnown RBP8.8□□□□□ -1
NEDD4L-209ENST00000456986 TBC1D16Q8TBP0 767 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 AFG1LQ8WV93 481 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 HPDLQ96IR7 371 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 PRPF18Q99633 342 aaKnown RBP8.8□□□□□ -1
NEDD4L-209ENST00000456986 PRRG3Q9BZD7 231 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 PCMTD2Q9NV79 361 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.8□□□□□ -1
NEDD4L-209ENST00000456986 SRP68Q9UHB9 627 aaKnown RBP8.8□□□□□ -1
NEDD4L-209ENST00000456986 TAGLN3Q9UI15 199 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 DDX60Q8IY21 1712 aaKnown RBP8.8□□□□□ -1
NEDD4L-209ENST00000456986 A0A087X0T9 212 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 SOAT2O75908 522 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 FAM228BP0C875 321 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 MSR1P21757 451 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 ETFBP38117 255 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 KPNA1P52294 538 aaPredicted RBP8.8□□□□□ -1
NEDD4L-209ENST00000456986 PRKCEQ02156 737 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 KCNV2Q8TDN2 545 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 SEPT1Q8WYJ6 367 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 CLMNQ96JQ2 1002 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 RGPD1P0DJD0 1748 aa8.8□□□□□ -1
NEDD4L-209ENST00000456986 NINQ8N4C6 2090 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 RBP1P09455 135 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 RARBP10826 455 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 BCAT1P54687 386 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 NTRK3Q16288 839 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 GPR141Q7Z602 305 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 TRPC7Q9HCX4 862 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 C20orf96Q9NUD7 363 aaPredicted RBP8.79□□□□□ -1
NEDD4L-209ENST00000456986 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.79□□□□□ -1
NEDD4L-209ENST00000456986 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.79□□□□□ -1
NEDD4L-209ENST00000456986 TOPAZ1Q8N9V7 1692 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 KATNA1O75449 491 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 ARF4P18085 180 aaPredicted RBP8.79□□□□□ -1
NEDD4L-209ENST00000456986 TRIP10Q15642 601 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 ZDHHC15Q96MV8 337 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 THAP1Q9NVV9 213 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 CFAP99D6REC4 459 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 HIST1H2AGP0C0S8 130 aaPredicted RBP8.79□□□□□ -1
NEDD4L-209ENST00000456986 HIST1H2ADP20671 130 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 GCNT1Q02742 428 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 SLC30A5Q8TAD4 765 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 HIST1H2AHQ96KK5 128 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 FAM129BQ96TA1 746 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 HIST1H2AJQ99878 128 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 H2AFJQ9BTM1 129 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 GANQ9H2C0 597 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 NCKIPSDQ9NZQ3 722 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 TRIM10Q9UDY6 481 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 ZNRF3Q9ULT6 936 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 SORBS3O60504 671 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 FAM200BP0CF97 657 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 USP10Q14694 798 aaKnown RBP8.79□□□□□ -1
NEDD4L-209ENST00000456986 CHI3L2Q15782 390 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 PCNX4Q63HM2 1172 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.79□□□□□ -1
NEDD4L-209ENST00000456986 TMPRSS6Q8IU80 811 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 SPATA2LQ8IUW3 424 aaPredicted RBP8.79□□□□□ -1
NEDD4L-209ENST00000456986 WDR49Q8IV35 697 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 ANKZF1Q9H8Y5 726 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 SPATA2Q9UM82 520 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 HACD1B0YJ81 288 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 LIN7AO14910 233 aaPredicted RBP8.79□□□□□ -1
NEDD4L-209ENST00000456986 SNPHO15079 494 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 CST8O60676 142 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 ECM2O94769 699 aaPredicted RBP8.79□□□□□ -1
NEDD4L-209ENST00000456986 TNFAIP8O95379 198 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 ABHD2P08910 425 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 RXRBP28702 533 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 HERVK_113P62684 666 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 FKBP1AP62942 108 aaKnown RBP8.79□□□□□ -1
NEDD4L-209ENST00000456986 GPAT2Q6NUI2 795 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 SLC26A11Q86WA9 606 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 EXT2Q93063 718 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 SPRTNQ9H040 489 aaPredicted RBP8.79□□□□□ -1
NEDD4L-209ENST00000456986 LRRC40Q9H9A6 602 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 MAPRE3Q9UPY8 281 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 SPATA31A6Q5VVP1 1343 aa8.79□□□□□ -1
NEDD4L-209ENST00000456986 PI4K2BG5E9Z4 385 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms