RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 SMPD4Q9NXE4 827 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 IL37Q9NZH6 218 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 CFAP97Q9P2B7 532 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 PILRBQ9UKJ0 227 aa12.67□□□□□ -0.38
LMCD1-206ENST00000456506 E2F8A0AVK6 867 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 FAM92AA1XBS5 289 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 CLDN5O00501 218 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 SLC9A3R1O14745 358 aaPredicted RBP12.66□□□□□ -0.38
LMCD1-206ENST00000456506 GREM1O60565 184 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 STAU1O95793 577 aaKnown RBP12.66□□□□□ -0.38
LMCD1-206ENST00000456506 TNNC2P02585 160 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 CAPNS1P04632 268 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 ZDHHC11BP0C7U3 371 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 ADH5P11766 374 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 ENGP17813 658 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 PTPN1P18031 435 aaKnown RBP12.66□□□□□ -0.38
LMCD1-206ENST00000456506 ANXA13P27216 316 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 GNL1P36915 607 aaPredicted RBP12.66□□□□□ -0.38
LMCD1-206ENST00000456506 STAT6P42226 847 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 TNFRSF4P43489 277 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 DHPSP49366 369 aaPredicted RBP12.66□□□□□ -0.38
LMCD1-206ENST00000456506 SEMA3BQ13214 749 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 SLC39A14Q15043 492 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 SURF1Q15526 300 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 TRIM61Q5EBN2 209 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 SPDYCQ5MJ68 293 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 CNNM4Q6P4Q7 775 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 SLC23A3Q6PIS1 610 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 SYT12Q8IV01 421 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 WHAMMQ8TF30 809 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 NOC3LQ8WTT2 800 aaKnown RBP12.66□□□□□ -0.38
LMCD1-206ENST00000456506 USP28Q96RU2 1077 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 CGRRF1Q99675 332 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 PANK2Q9BZ23 570 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 ELOVL4Q9GZR5 314 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 EHD2Q9NZN4 543 aa12.66□□□□□ -0.38
LMCD1-206ENST00000456506 UPK3BL1B0FP48 263 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 UPK3BL2E5RIL1 263 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 EIF3DO15371 548 aaKnown RBP eCLIP12.65□□□□□ -0.38
LMCD1-206ENST00000456506 HOXC11O43248 304 aaPredicted RBP12.65□□□□□ -0.38
LMCD1-206ENST00000456506 COCHO43405 550 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 APODP05090 189 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 GABRG2P18507 467 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 SYT1P21579 422 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 TXLNAP40222 546 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 GRIA2P42262 883 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 PGFP49763 221 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 KDSRQ06136 332 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 CYP24A1Q07973 514 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 PSMD6Q15008 389 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 SNRNP35Q16560 246 aaKnown RBP12.65□□□□□ -0.38
LMCD1-206ENST00000456506 EOGTQ5NDL2 527 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 LY6G5CQ5SRR4 150 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 LPCAT2Q7L5N7 544 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 MIB1Q86YT6 1006 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 NUP93Q8N1F7 819 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 B3GALNT2Q8NCR0 500 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 PLEKHO2Q8TD55 490 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 OVCA2Q8WZ82 227 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 KCNK16Q96T55 309 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 TRIM9Q9C026 710 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 TNMDQ9H2S6 317 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 KIAA1586Q9HCI6 787 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 ARHGEF4Q9NR80 690 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 AGPAT3Q9NRZ7 376 aa12.65□□□□□ -0.38
LMCD1-206ENST00000456506 ATXN2Q99700 1313 aaKnown RBP12.64□□□□□ -0.39
LMCD1-206ENST00000456506 A0A1W2PQF6 199 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 FAM221BA6H8Z2 402 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 TMEM8BA6NDV4 472 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 SRRM3A6NNA2 597 aaPredicted RBP12.64□□□□□ -0.39
LMCD1-206ENST00000456506 TRIM24O15164 1050 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 TULP3O75386 442 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 ALDH1A2O94788 518 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 ADH1CP00326 375 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 MBL2P11226 248 aaPredicted RBP12.64□□□□□ -0.39
LMCD1-206ENST00000456506 ITPKAP23677 461 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 HOXD12P35452 270 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
LMCD1-206ENST00000456506 CEBPZQ03701 1054 aaKnown RBP12.64□□□□□ -0.39
LMCD1-206ENST00000456506 LMAN2Q12907 356 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 WDR72Q3MJ13 1102 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 TDRD10Q5VZ19 366 aaKnown RBP12.64□□□□□ -0.39
LMCD1-206ENST00000456506 ARMCX6Q7L4S7 300 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 HS2ST1Q7LGA3 356 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 BBS7Q8IWZ6 715 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 CCDC65Q8IXS2 484 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 PDILTQ8N807 584 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 ZMIZ2Q8NF64 920 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 SCAMP5Q8TAC9 235 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 KCNV2Q8TDN2 545 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 SCFD1Q8WVM8 642 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 HMGB4Q8WW32 186 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 OTUB2Q96DC9 234 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 P2RY11Q96G91 374 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 SLITRK1Q96PX8 696 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 MMS19Q96T76 1030 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 SDCBP2Q9H190 292 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 CCSER2Q9H7U1 834 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 VRTNQ9H8Y1 702 aa12.64□□□□□ -0.39
LMCD1-206ENST00000456506 CAPN10Q9HC96 672 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms