RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 KRT23Q9C075 422 aa4.17□□□□□ -1.74
RBM39-220ENST00000455343 TMPRSS5Q9H3S3 457 aa4.17□□□□□ -1.74
RBM39-220ENST00000455343 ARHGEF3Q9NR81 526 aa4.17□□□□□ -1.74
RBM39-220ENST00000455343 KCNH7Q9NS40 1196 aa4.17□□□□□ -1.74
RBM39-220ENST00000455343 ZSCAN32Q9NX65 697 aa4.17□□□□□ -1.74
RBM39-220ENST00000455343 RALYQ9UKM9 306 aaKnown RBP4.17□□□□□ -1.74
RBM39-220ENST00000455343 CA14Q9ULX7 337 aa4.17□□□□□ -1.74
RBM39-220ENST00000455343 GINS2Q9Y248 185 aa4.17□□□□□ -1.74
RBM39-220ENST00000455343 INVSQ9Y283 1065 aa4.17□□□□□ -1.74
RBM39-220ENST00000455343 KIAA1217Q5T5P2 1943 aa4.17□□□□□ -1.74
RBM39-220ENST00000455343 ANKRD11Q6UB99 2663 aaPredicted RBP4.17□□□□□ -1.74
RBM39-220ENST00000455343 COL1A2P08123 1366 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 SMG1Q96Q15 3661 aaKnown RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 FASNP49327 2511 aaKnown RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 KANSL1LA0AUZ9 987 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 SHISA7A6NL88 538 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 H7BY64 318 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 B4GALT3O60512 393 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 ZNF623O75123 536 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 CCNE2O96020 404 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 TDGF1P13385 188 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 LAMP2P13473 410 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 ZNF28P17035 718 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 ZSCAN20P17040 1043 aaPredicted RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 SDSP20132 328 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 MAGEA9P43362 315 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 GFRA1P56159 465 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 GPC5P78333 572 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 HTR4Q13639 388 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 ACAP1Q15027 740 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 IMMTQ16891 758 aaKnown RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 SV2CQ496J9 727 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 LARP1BQ659C4 914 aaKnown RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 MRM1Q6IN84 353 aaKnown RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 BORAQ6PGQ7 559 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 RSPO2Q6UXX9 243 aaPredicted RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 CYB5R4Q7L1T6 521 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 CCDC60Q8IWA6 550 aaPredicted RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 PPIL6Q8IXY8 311 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 RNF168Q8IYW5 571 aaPredicted RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 TXNDC5Q8NBS9 432 aaKnown RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 RCBTB1Q8NDN9 531 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 ATRIPQ8WXE1 791 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 CUL5Q93034 780 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 CLDN23Q96B33 292 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 C1orf159Q96HA4 380 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 MAP3K14Q99558 947 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 MXRA8Q9BRK3 442 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 RPP25Q9BUL9 199 aaKnown RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 SPZ1Q9BXG8 430 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 FAM126AQ9BYI3 521 aaPredicted RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 NRDE2Q9H7Z3 1164 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 CAPN10Q9HC96 672 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 TBC1D13Q9NVG8 400 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 NCDNQ9UBB6 729 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 STK39Q9UEW8 545 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 COA3Q9Y2R0 106 aaPredicted RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 MTF2Q9Y483 593 aaPredicted RBP4.16□□□□□ -1.74
RBM39-220ENST00000455343 MYH7P12883 1935 aa4.16□□□□□ -1.74
RBM39-220ENST00000455343 PLXNA4Q9HCM2 1894 aa4.15□□□□□ -1.74
RBM39-220ENST00000455343 FAM208BQ5VWN6 2430 aa4.15□□□□□ -1.74
RBM39-220ENST00000455343 ZFYVE26Q68DK2 2539 aa4.15□□□□□ -1.74
RBM39-220ENST00000455343 CCDC195A0A1B0GUA6 201 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 TCRBV5S2A0A599 114 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 C9orf118A6NHY6 69 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 DDX3XO00571 662 aaKnown RBP eCLIP4.15□□□□□ -1.75
RBM39-220ENST00000455343 TEX28O15482 410 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 LAMTOR5O43504 91 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 LRP3O75074 770 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 ZC3H11AO75152 810 aaKnown RBP eCLIP4.15□□□□□ -1.75
RBM39-220ENST00000455343 OFD1O75665 1012 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 RFPL2O75678 378 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 CPP00450 1065 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 VTNP04004 478 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 SSBP05455 408 aaKnown RBP eCLIP4.15□□□□□ -1.75
RBM39-220ENST00000455343 DARSP14868 501 aaKnown RBP4.15□□□□□ -1.75
RBM39-220ENST00000455343 TNFRSF1AP19438 455 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 KLRC2P26717 231 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 RPS9P46781 194 aaKnown RBP4.15□□□□□ -1.75
RBM39-220ENST00000455343 SLC11A1P49279 550 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 NLRP11P59045 1033 aaKnown RBP4.15□□□□□ -1.75
RBM39-220ENST00000455343 SF1Q15637 639 aaKnown RBP4.15□□□□□ -1.75
RBM39-220ENST00000455343 CEP55Q53EZ4 464 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 SLC44A4Q53GD3 710 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 EMC4Q5J8M3 183 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 CPZQ66K79 652 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 DENND5AQ6IQ26 1287 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 FAM124AQ86V42 546 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 GPR65Q8IYL9 337 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 IGDCC4Q8TDY8 1250 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 HDAC7Q8WUI4 952 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 FGF14Q92915 247 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 SECISBP2LQ93073 1101 aaKnown RBP4.15□□□□□ -1.75
RBM39-220ENST00000455343 LOXL4Q96JB6 756 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 CHAMP1Q96JM3 812 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 LCORQ96JN0 433 aaPredicted RBP4.15□□□□□ -1.75
RBM39-220ENST00000455343 RPS6KC1Q96S38 1066 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 YIPF4Q9BSR8 244 aa4.15□□□□□ -1.75
RBM39-220ENST00000455343 SSBP3Q9BWW4 388 aaPredicted RBP4.15□□□□□ -1.75
RBM39-220ENST00000455343 C1QTNF3Q9BXJ4 246 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms