RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 PRMT8Q9NR22 394 aaPredicted RBP21.57■■□□□ 1.04
TNRC18-208ENST00000455076 LMBRD1Q9NUN5 540 aa21.57■■□□□ 1.04
TNRC18-208ENST00000455076 FAM86C1Q9NVL1 165 aa21.57■■□□□ 1.04
TNRC18-208ENST00000455076 NDRG2Q9UN36 371 aaKnown RBP21.57■■□□□ 1.04
TNRC18-208ENST00000455076 CETN1Q12798 172 aa21.56■■□□□ 1.04
TNRC18-208ENST00000455076 LRRC32Q14392 662 aa21.56■■□□□ 1.04
TNRC18-208ENST00000455076 EML3Q32P44 896 aa21.56■■□□□ 1.04
TNRC18-208ENST00000455076 TRIM68Q6AZZ1 485 aa21.56■■□□□ 1.04
TNRC18-208ENST00000455076 MED15Q96RN5 788 aa21.56■■□□□ 1.04
TNRC18-208ENST00000455076 SRRTQ9BXP5 876 aaKnown RBP21.56■■□□□ 1.04
TNRC18-208ENST00000455076 UBXN6Q9BZV1 441 aa21.56■■□□□ 1.04
TNRC18-208ENST00000455076 EBF3Q9H4W6 596 aa21.56■■□□□ 1.04
TNRC18-208ENST00000455076 SCML2Q9UQR0 700 aa21.56■■□□□ 1.04
TNRC18-208ENST00000455076 OTOL1A6NHN0 477 aaPredicted RBP21.55■■□□□ 1.04
TNRC18-208ENST00000455076 LEFTY2O00292 366 aa21.55■■□□□ 1.04
TNRC18-208ENST00000455076 CCDC192P0DO97 292 aa21.55■■□□□ 1.04
TNRC18-208ENST00000455076 MRE11P49959 708 aa21.55■■□□□ 1.04
TNRC18-208ENST00000455076 IFRD2Q12894 506 aaPredicted RBP21.55■■□□□ 1.04
TNRC18-208ENST00000455076 CCINQ13939 588 aa21.55■■□□□ 1.04
TNRC18-208ENST00000455076 ZNF394Q53GI3 561 aa21.55■■□□□ 1.04
TNRC18-208ENST00000455076 DGKKQ5KSL6 1271 aa21.55■■□□□ 1.04
TNRC18-208ENST00000455076 HECTD3Q5T447 861 aa21.55■■□□□ 1.04
TNRC18-208ENST00000455076 GPRIN1Q7Z2K8 1008 aa21.55■■□□□ 1.04
TNRC18-208ENST00000455076 DDX42Q86XP3 938 aaKnown RBP eCLIP21.55■■□□□ 1.04
TNRC18-208ENST00000455076 SYNPOQ8N3V7 929 aa21.55■■□□□ 1.04
TNRC18-208ENST00000455076 ATP2A3Q93084 1043 aa21.55■■□□□ 1.04
TNRC18-208ENST00000455076 ZFRQ96KR1 1074 aaKnown RBP21.55■■□□□ 1.04
TNRC18-208ENST00000455076 SPATA6Q9NWH7 488 aaPredicted RBP21.55■■□□□ 1.04
TNRC18-208ENST00000455076 DUS2Q9NX74 493 aaKnown RBP21.55■■□□□ 1.04
TNRC18-208ENST00000455076 GMIPQ9P107 970 aa21.55■■□□□ 1.04
TNRC18-208ENST00000455076 CPQQ9Y646 472 aa21.55■■□□□ 1.04
TNRC18-208ENST00000455076 USP3Q9Y6I4 520 aa21.55■■□□□ 1.04
TNRC18-208ENST00000455076 ZFHX2Q9C0A1 2572 aaPredicted RBP21.55■■□□□ 1.04
TNRC18-208ENST00000455076 TRDMT1O14717 391 aaKnown RBP21.54■■□□□ 1.04
TNRC18-208ENST00000455076 COCHO43405 550 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 LAMTOR5O43504 91 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 AFPP02771 609 aaKnown RBP21.54■■□□□ 1.04
TNRC18-208ENST00000455076 SP9P0CG40 484 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 ARSAP15289 507 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 IFNAR2P48551 515 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 KIF11P52732 1056 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 AMPD2Q01433 879 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 GCNT1Q02742 428 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 KCNH2Q12809 1159 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 CPA6Q8N4T0 437 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 NELL1Q92832 810 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 HEXIM2Q96MH2 286 aaKnown RBP21.54■■□□□ 1.04
TNRC18-208ENST00000455076 NT5C1BQ96P26 610 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 NUP62CLQ9H1M0 184 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 ECT2Q9H8V3 914 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 LMAN1LQ9HAT1 526 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 CYLDQ9NQC7 956 aa21.54■■□□□ 1.04
TNRC18-208ENST00000455076 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.54■■□□□ 1.04
TNRC18-208ENST00000455076 ACO1P21399 889 aaKnown RBP21.53■■□□□ 1.04
TNRC18-208ENST00000455076 MTAPQ13126 283 aa21.53■■□□□ 1.04
TNRC18-208ENST00000455076 TMEM196Q5HYL7 178 aa21.53■■□□□ 1.04
TNRC18-208ENST00000455076 CCDC186Q7Z3E2 898 aa21.53■■□□□ 1.04
TNRC18-208ENST00000455076 ZNF276Q8N554 614 aa21.53■■□□□ 1.04
TNRC18-208ENST00000455076 ANKRD52Q8NB46 1076 aa21.53■■□□□ 1.04
TNRC18-208ENST00000455076 TLR8Q9NR97 1041 aaKnown RBP21.53■■□□□ 1.04
TNRC18-208ENST00000455076 CHORDC1Q9UHD1 332 aaPredicted RBP21.53■■□□□ 1.04
TNRC18-208ENST00000455076 WNT6Q9Y6F9 365 aa21.53■■□□□ 1.04
TNRC18-208ENST00000455076 PAPSS2O95340 614 aaPredicted RBP21.52■■□□□ 1.04
TNRC18-208ENST00000455076 NFATC1O95644 943 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 ABL1P00519 1130 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 PAEPP09466 180 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 MBL2P11226 248 aaPredicted RBP21.52■■□□□ 1.04
TNRC18-208ENST00000455076 GJA4P35212 333 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 GAS6Q14393 721 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 PON2Q15165 354 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 RAB41Q5JT25 222 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 KLHDC10Q6PID8 442 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 ALYREFQ86V81 257 aaKnown RBP21.52■■□□□ 1.04
TNRC18-208ENST00000455076 EHBP1Q8NDI1 1231 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 TTC8Q8TAM2 541 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 GBP4Q96PP9 640 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 SEMA4AQ9H3S1 761 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 CCSER2Q9H7U1 834 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 KIAA1257Q9ULG3 409 aa21.52■■□□□ 1.04
TNRC18-208ENST00000455076 RIF1Q5UIP0 2472 aaKnown RBP21.51■■□□□ 1.03
TNRC18-208ENST00000455076 E2F8A0AVK6 867 aa21.51■■□□□ 1.03
TNRC18-208ENST00000455076 SLC9A3R1O14745 358 aaPredicted RBP21.51■■□□□ 1.03
TNRC18-208ENST00000455076 TLR5O60602 858 aa21.51■■□□□ 1.03
TNRC18-208ENST00000455076 TDGF1P13385 188 aa21.51■■□□□ 1.03
TNRC18-208ENST00000455076 PGFP49763 221 aa21.51■■□□□ 1.03
TNRC18-208ENST00000455076 PSEN1P49768 467 aa21.51■■□□□ 1.03
TNRC18-208ENST00000455076 CT47A1Q5JQC4 288 aaPredicted RBP21.51■■□□□ 1.03
TNRC18-208ENST00000455076 SMYD5Q6GMV2 418 aa21.51■■□□□ 1.03
TNRC18-208ENST00000455076 TTC30AQ86WT1 665 aa21.51■■□□□ 1.03
TNRC18-208ENST00000455076 IRF2BP1Q8IU81 584 aa21.51■■□□□ 1.03
TNRC18-208ENST00000455076 SPEM1Q8N4L4 309 aa21.51■■□□□ 1.03
TNRC18-208ENST00000455076 JAKMIP2Q96AA8 810 aa21.51■■□□□ 1.03
TNRC18-208ENST00000455076 CNOT6LQ96LI5 555 aaKnown RBP21.51■■□□□ 1.03
TNRC18-208ENST00000455076 CYP26A1O43174 497 aa21.5■■□□□ 1.03
TNRC18-208ENST00000455076 VDRP11473 427 aa21.5■■□□□ 1.03
TNRC18-208ENST00000455076 ERCC5P28715 1186 aaPredicted RBP21.5■■□□□ 1.03
TNRC18-208ENST00000455076 CCR3P51677 355 aa21.5■■□□□ 1.03
TNRC18-208ENST00000455076 ZNF132P52740 706 aa21.5■■□□□ 1.03
TNRC18-208ENST00000455076 BCAT1P54687 386 aa21.5■■□□□ 1.03
TNRC18-208ENST00000455076 LRMPQ12912 555 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 797 ms