RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SCAMP5Q8TAC9 235 aa20.52■□□□□ 0.88
SGCE-207ENST00000447873 FEZF2Q8TBJ5 459 aa20.52■□□□□ 0.88
SGCE-207ENST00000447873 GPR152Q8TDT2 470 aa20.52■□□□□ 0.88
SGCE-207ENST00000447873 CEP295NLQ96MC4 621 aa20.52■□□□□ 0.88
SGCE-207ENST00000447873 MCEEQ96PE7 176 aa20.52■□□□□ 0.88
SGCE-207ENST00000447873 METTL5Q9NRN9 209 aaKnown RBP20.52■□□□□ 0.88
SGCE-207ENST00000447873 ANAPC7Q9UJX3 599 aa20.52■□□□□ 0.88
SGCE-207ENST00000447873 EPOPA6NHQ4 379 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 SART1O43290 800 aaKnown RBP20.51■□□□□ 0.87
SGCE-207ENST00000447873 HADHBP55084 474 aaKnown RBP20.51■□□□□ 0.87
SGCE-207ENST00000447873 RNASE9P60153 205 aaKnown RBP20.51■□□□□ 0.87
SGCE-207ENST00000447873 RPL7AP62424 266 aaKnown RBP20.51■□□□□ 0.87
SGCE-207ENST00000447873 MRPS5P82675 430 aaKnown RBP20.51■□□□□ 0.87
SGCE-207ENST00000447873 LRIT3Q3SXY7 679 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 EFHC1Q5JVL4 640 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 PPP1R15BQ5SWA1 713 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 LILRA6Q6PI73 481 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 DENND5BQ6ZUT9 1274 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 PIWIL1Q96J94 861 aaKnown RBP20.51■□□□□ 0.87
SGCE-207ENST00000447873 C16orf45Q96MC5 204 aaPredicted RBP20.51■□□□□ 0.87
SGCE-207ENST00000447873 ALS2CR12Q96Q35 445 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 YIPF1Q9Y548 306 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 MYO9BQ13459 2157 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 GREB1Q4ZG55 1949 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 ZNF500O60304 480 aaPredicted RBP20.51■□□□□ 0.87
SGCE-207ENST00000447873 ATF6P18850 670 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 SCNN1AP37088 669 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 SLC26A9Q7LBE3 791 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 STKLD1Q8NE28 680 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 TPCN2Q8NHX9 752 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 GIPC2Q8TF65 315 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 NDRG1Q92597 394 aaKnown RBP20.51■□□□□ 0.87
SGCE-207ENST00000447873 FBXO44Q9H4M3 255 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 COLQQ9Y215 455 aaPredicted RBP20.51■□□□□ 0.87
SGCE-207ENST00000447873 USP3Q9Y6I4 520 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 CAPN6Q9Y6Q1 641 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 MYO16Q9Y6X6 1858 aa20.51■□□□□ 0.87
SGCE-207ENST00000447873 MTCL1Q9Y4B5 1905 aaKnown RBP20.5■□□□□ 0.87
SGCE-207ENST00000447873 ATG2AQ2TAZ0 1938 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 TMEM191CA6NGB0 347 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 MYO1FO00160 1098 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 GRAP2O75791 330 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 RTN3O95197 1032 aaPredicted RBP20.5■□□□□ 0.87
SGCE-207ENST00000447873 CLCN4P51793 760 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 DAOAP59103 153 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 GNG11P61952 73 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 TAF5Q15542 800 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 PTPROQ16827 1216 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 ZNF569Q5MCW4 686 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 PM20D1Q6GTS8 502 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 CCDC149Q6ZUS6 474 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 NYAP1Q6ZVC0 841 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 SCML4Q8N228 414 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 KREMEN2Q8NCW0 462 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 TRIM58Q8NG06 486 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 FAM149B1Q96BN6 582 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 FBXW11Q9UKB1 542 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 INSL5Q9Y5Q6 135 aa20.5■□□□□ 0.87
SGCE-207ENST00000447873 ZNF638Q14966 1978 aaKnown RBP20.5■□□□□ 0.87
SGCE-207ENST00000447873 COL4A4P53420 1690 aaPredicted RBP20.5■□□□□ 0.87
SGCE-207ENST00000447873 SLC38A8A6NNN8 435 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 HSF2BPO75031 334 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 CLASP2O75122 1294 aaKnown RBP20.49■□□□□ 0.87
SGCE-207ENST00000447873 PALMO75781 387 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 RFC1P35251 1148 aaPredicted RBP20.49■□□□□ 0.87
SGCE-207ENST00000447873 TWF1Q12792 350 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 VEPH1Q14D04 833 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 EMC1Q8N766 993 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 JOSD2Q8TAC2 188 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 SLC7A14Q8TBB6 771 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 IRGQQ8WZA9 623 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 BTBD6Q96KE9 485 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 TRIM7Q9C029 511 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 ZNF576Q9H609 170 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 EHD2Q9NZN4 543 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 TMEM59LQ9UK28 342 aa20.49■□□□□ 0.87
SGCE-207ENST00000447873 GRID2IPA4D2P6 1211 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 YJEFN3A6XGL0 299 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 E7ENQ6 273 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 RFXAPO00287 272 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 PER2O15055 1255 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 BUB1BO60566 1050 aaPredicted RBP20.48■□□□□ 0.87
SGCE-207ENST00000447873 C1RP00736 705 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 GLI1P08151 1106 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 YWHAQP27348 245 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 EPHB3P54753 998 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 USP46P62068 366 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 YWHAZP63104 245 aaKnown RBP20.48■□□□□ 0.87
SGCE-207ENST00000447873 PLD1Q13393 1074 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 MESDQ14696 234 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 DAAM2Q86T65 1068 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 RBM23Q86U06 439 aaKnown RBP20.48■□□□□ 0.87
SGCE-207ENST00000447873 SYCE1Q8N0S2 351 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 GOLGA1Q92805 767 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 KHSRPQ92945 711 aaKnown RBP eCLIP20.48■□□□□ 0.873e-6■■■■□ 25.3
SGCE-207ENST00000447873 ASNSD1Q9NWL6 643 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 COMMD8Q9NX08 183 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 IL37Q9NZH6 218 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 SCML2Q9UQR0 700 aa20.48■□□□□ 0.87
SGCE-207ENST00000447873 TMEM110-MUSTN1A8MSY1 372 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms