RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MBD4O95243 580 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 APBB3O95704 486 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 SOD2P04179 222 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 SERPINF2P08697 491 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 UBTFL1P0CB47 393 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-205ENST00000447267 TARDBPQ13148 414 aaKnown RBP eCLIP5.65□□□□□ -1.5
SDCBP-205ENST00000447267 WDR43Q15061 677 aaKnown RBP eCLIP5.65□□□□□ -1.5
SDCBP-205ENST00000447267 PLCB4Q15147 1175 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 AXDND1Q5T1B0 1012 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-205ENST00000447267 USP49Q70CQ1 688 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 LPCAT2Q7L5N7 544 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 TTC30AQ86WT1 665 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 PTRH1Q86Y79 214 aaKnown RBP5.65□□□□□ -1.5
SDCBP-205ENST00000447267 AMOTL1Q8IY63 956 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 ZNF444Q8N0Y2 327 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-205ENST00000447267 RGS22Q8NE09 1264 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 DACT3Q96B18 629 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-205ENST00000447267 RSPRY1Q96DX4 576 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 ZFYVE19Q96K21 471 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 KCNC2Q96PR1 638 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 APOL6Q9BWW8 343 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 SLC12A9Q9BXP2 914 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 MRPL9Q9BYD2 267 aaKnown RBP5.65□□□□□ -1.5
SDCBP-205ENST00000447267 EPN3Q9H201 632 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 IL21RQ9HBE5 538 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 PXMP2Q9NR77 195 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 ATP8A2Q9NTI2 1148 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 GTSE1Q9NYZ3 720 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 GDE1Q9NZC3 331 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 CNOT6Q9ULM6 557 aaKnown RBP5.65□□□□□ -1.5
SDCBP-205ENST00000447267 PPT2Q9UMR5 302 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 PLA2G2DQ9UNK4 145 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 PLAAQ9Y263 795 aa5.65□□□□□ -1.5
SDCBP-205ENST00000447267 KDM3AQ9Y4C1 1321 aa5.65□□□□□ -1.51
SDCBP-205ENST00000447267 CABIN1Q9Y6J0 2220 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 SPTBN1Q01082 2364 aaKnown RBP5.64□□□□□ -1.51
SDCBP-205ENST00000447267 TCRBV5S4A2TA0A5A2 114 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 H0Y8X5 98 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 HRKO00198 91 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 NRP1O14786 923 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 KLK10O43240 276 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 IGSF3O75054 1194 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 AGFG2O95081 481 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 EGFP01133 1207 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 CHGBP05060 677 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 ALDH2P05091 517 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 RHOP08100 348 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 PRF1P14222 555 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 ADRA1BP35368 520 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 BUD31P41223 144 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-205ENST00000447267 GLUD2P49448 558 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 ZNF445P59923 1031 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 DMC1Q14565 340 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 RTP5Q14D33 572 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 NCAPHQ15003 741 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 KIZQ2M2Z5 673 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 RRP12Q5JTH9 1297 aaKnown RBP5.64□□□□□ -1.51
SDCBP-205ENST00000447267 LYSMD4Q5XG99 296 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 FSTL4Q6MZW2 842 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 KCNV1Q6PIU1 500 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 IGDCC3Q8IVU1 814 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 MOCOSQ96EN8 888 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 HERC2P3Q9BVR0 1158 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 CDADC1Q9BWV3 514 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 TNFRSF12AQ9NP84 129 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 IMPACTQ9P2X3 320 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 ACSL6Q9UKU0 697 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.64□□□□□ -1.51
SDCBP-205ENST00000447267 BTBD3Q9Y2F9 522 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 FAN1Q9Y2M0 1017 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 PRG3Q9Y2Y8 225 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-205ENST00000447267 PCDHA2Q9Y5H9 948 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 BAZ2AQ9UIF9 1905 aaKnown RBP5.64□□□□□ -1.51
SDCBP-205ENST00000447267 MYH4Q9Y623 1939 aa5.64□□□□□ -1.51
SDCBP-205ENST00000447267 HIVEP1P15822 2718 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 RRN3P2A6NIE6 340 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 HEPACAM2A8MVW5 462 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 SRGAP3O43295 1099 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 HNRNPA1P09651 372 aaKnown RBP eCLIP5.63□□□□□ -1.51
SDCBP-205ENST00000447267 TGFB3P10600 412 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 ZSCAN20P17040 1043 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-205ENST00000447267 PRKCAP17252 672 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 FGFR4P22455 802 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 U2AF2P26368 475 aaKnown RBP eCLIP5.63□□□□□ -1.51
SDCBP-205ENST00000447267 ACTN2P35609 894 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 TCF7P36402 384 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-205ENST00000447267 PMS1P54277 932 aaKnown RBP5.63□□□□□ -1.51
SDCBP-205ENST00000447267 UCNP55089 124 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 MLLT6P55198 1093 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-205ENST00000447267 DSG1Q02413 1049 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 MVKQ03426 396 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 TBC1D25Q3MII6 688 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 TNNI3KQ59H18 835 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 NOMO2Q5JPE7 1267 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 ANO7Q6IWH7 933 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 PRSS55Q6UWB4 352 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-205ENST00000447267 METTL7BQ6UX53 244 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 BTNL9Q6UXG8 535 aa5.63□□□□□ -1.51
SDCBP-205ENST00000447267 C11orf74Q86VG3 221 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms