RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 A0A087X0T9 212 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 HTR3EA5X5Y0 456 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 FAM228BP0C875 321 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 ARL2P36404 184 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 SF3A3Q12874 501 aaKnown RBP eCLIP13.67□□□□□ -0.221e-6■■■□□ 19.1
DDX56-206ENST00000446987 ACSBG2Q5FVE4 666 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 IER5Q5VY09 327 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 FAM109BQ6ICB4 259 aaPredicted RBP13.67□□□□□ -0.22
DDX56-206ENST00000446987 PADI6Q6TGC4 694 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 OTOP2Q7RTS6 562 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 DAAM2Q86T65 1068 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 FNDC8Q8TC99 324 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 BSNDQ8WZ55 320 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 HNRNPABQ99729 332 aaKnown RBP13.67□□□□□ -0.22
DDX56-206ENST00000446987 BTBD10Q9BSF8 475 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 EIF2AQ9BY44 585 aaKnown RBP13.67□□□□□ -0.22
DDX56-206ENST00000446987 SEMA4AQ9H3S1 761 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 IFT122Q9HBG6 1241 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 NENFQ9UMX5 172 aa13.67□□□□□ -0.22
DDX56-206ENST00000446987 R3HDM2Q9Y2K5 976 aaKnown RBP13.67□□□□□ -0.22
DDX56-206ENST00000446987 CHD7Q9P2D1 2997 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 ARHGEF35A5YM69 484 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 GAS2O43903 313 aaKnown RBP13.66□□□□□ -0.22
DDX56-206ENST00000446987 CBFA2T3O75081 653 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 PHF2O75151 1096 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 SUPT3HO75486 399 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 UBTFL6P0CB48 400 aaPredicted RBP13.66□□□□□ -0.22
DDX56-206ENST00000446987 GLRA2P23416 452 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 CD52P31358 61 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 UBA7P41226 1012 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 EMP3P54852 163 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 AMPD3Q01432 767 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 PLCB3Q01970 1234 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 ADCY1Q08828 1119 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 CNKSR3Q6P9H4 555 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 C1orf186Q6ZWK4 172 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 NT5DC3Q86UY8 548 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 JAMLQ86YT9 394 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 RIBC1Q8N443 379 aaPredicted RBP13.66□□□□□ -0.22
DDX56-206ENST00000446987 FBXO25Q8TCJ0 367 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 PRPF31Q8WWY3 499 aaKnown RBP13.66□□□□□ -0.22
DDX56-206ENST00000446987 TRIM51Q9BSJ1 452 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 CCDC113Q9H0I3 377 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 NT5C3AQ9H0P0 336 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 ERVK-5Q9HDB9 667 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 PCYOX1Q9UHG3 505 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 COL4A3BPQ9Y5P4 624 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 SQORQ9Y6N5 450 aa13.66□□□□□ -0.22
DDX56-206ENST00000446987 A0A087WZ62 844 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 C2CD2LO14523 706 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 CSDE1O75534 798 aaKnown RBP13.65□□□□□ -0.22
DDX56-206ENST00000446987 CHRNA3P32297 505 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 CRYBB1P53674 252 aaPredicted RBP13.65□□□□□ -0.22
DDX56-206ENST00000446987 GEMIN4P57678 1058 aaKnown RBP13.65□□□□□ -0.22
DDX56-206ENST00000446987 KLHL30Q0D2K2 578 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 LAMTOR4Q0VGL1 99 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 CAPSQ13938 189 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 LRRC14Q15048 493 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 ARSHQ5FYA8 562 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 RINT1Q6NUQ1 792 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 BORAQ6PGQ7 559 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 OLFML1Q6UWY5 402 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 RHPN2Q8IUC4 686 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 SDR16C5Q8N3Y7 309 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 SYT2Q8N9I0 419 aaPredicted RBP13.65□□□□□ -0.22
DDX56-206ENST00000446987 GAB3Q8WWW8 586 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 PSPC1Q8WXF1 523 aaKnown RBP13.65□□□□□ -0.22
DDX56-206ENST00000446987 FDXACB1Q9BRP7 624 aaPredicted RBP13.65□□□□□ -0.22
DDX56-206ENST00000446987 TCHPQ9BT92 498 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 CADM1Q9BY67 442 aaKnown RBP13.65□□□□□ -0.22
DDX56-206ENST00000446987 POLR3FQ9H1D9 316 aaPredicted RBP13.65□□□□□ -0.22
DDX56-206ENST00000446987 MINDY3Q9H8M7 445 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 PLK2Q9NYY3 685 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 CROTQ9UKG9 612 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 DNM3Q9UQ16 869 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 GINS2Q9Y248 185 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 CDH23Q9H251 3354 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 TTC3P53804 2025 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.65□□□□□ -0.22
DDX56-206ENST00000446987 A0A1W2PPC1 479 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 E9PBE3 544 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 NDC80O14777 642 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 MGEA5O60502 916 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 KRT36O76013 467 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 NOL4O94818 638 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 FGBP02675 491 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 PLA2G4BP0C869 781 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 DARSP14868 501 aaKnown RBP13.65□□□□□ -0.22
DDX56-206ENST00000446987 RAP1GDS1P52306 607 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 PLTPP55058 493 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 HDAC4P56524 1084 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 DEFB103AP81534 67 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 NR1H3Q13133 447 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 ASIC2Q16515 512 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.65□□□□□ -0.22
DDX56-206ENST00000446987 GRAMD4Q6IC98 578 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 Q6ZNX1 250 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 KBTBD2Q8IY47 623 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 BBS5Q8N3I7 341 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 GUF1Q8N442 669 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms